RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CHMP2AO43633 222 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 SLITRK3O94933 977 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 PBX1P40424 430 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 PABPC4Q13310 644 aaKnown RBP eCLIP23.75■■□□□ 1.392e-6■■■■□ 19.6
SPHK1-202ENST00000392496 FAM26FQ5R3K3 315 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 ANKRD40Q6AI12 368 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 CSGALNACT2Q8N6G5 542 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 PROCA1Q8NCQ7 364 aaPredicted RBP23.75■■□□□ 1.39
SPHK1-202ENST00000392496 NEK9Q8TD19 979 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 CNKSR2Q8WXI2 1034 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 ACAD9Q9H845 621 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 AGO4Q9HCK5 861 aaKnown RBP23.75■■□□□ 1.39
SPHK1-202ENST00000392496 A0A0G2JLL6 359 aaPredicted RBP23.75■■□□□ 1.39
SPHK1-202ENST00000392496 SPDYE5A6NIY4 337 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 TEX33O43247 280 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 NRDCO43847 1150 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 OFD1O75665 1012 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 KRT18P05783 430 aaKnown RBP23.75■■□□□ 1.39
SPHK1-202ENST00000392496 PRRT2Q7Z6L0 340 aaPredicted RBP23.75■■□□□ 1.39
SPHK1-202ENST00000392496 SEMA6BQ9H3T3 888 aa23.75■■□□□ 1.39
SPHK1-202ENST00000392496 A0A0G2JMZ2 1700 aa23.74■■□□□ 1.39
SPHK1-202ENST00000392496 MTMR1Q13613 665 aa23.74■■□□□ 1.39
SPHK1-202ENST00000392496 CTTNQ14247 550 aaKnown RBP23.74■■□□□ 1.39
SPHK1-202ENST00000392496 TREML2Q5T2D2 321 aa23.74■■□□□ 1.39
SPHK1-202ENST00000392496 FAM114A1Q8IWE2 563 aa23.74■■□□□ 1.39
SPHK1-202ENST00000392496 C17orf53Q8N3J3 647 aaPredicted RBP23.74■■□□□ 1.39
SPHK1-202ENST00000392496 MAGEC2Q9UBF1 373 aaPredicted RBP23.74■■□□□ 1.39
SPHK1-202ENST00000392496 N4BP3O15049 544 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 DHX15O43143 795 aaKnown RBP23.73■■□□□ 1.39
SPHK1-202ENST00000392496 LRRC63Q05C16 580 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 GIT2Q14161 759 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 TPH2Q8IWU9 490 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 MYOCDQ8IZQ8 938 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 TBC1D22BQ9NU19 505 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.73■■□□□ 1.39
SPHK1-202ENST00000392496 PCDHA2Q9Y5H9 948 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 NPHP3-ACAD11A0A0J9YXS1 232 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 MYCLP12524 364 aaPredicted RBP23.73■■□□□ 1.39
SPHK1-202ENST00000392496 CCND2P30279 289 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 TTLL12Q14166 644 aaPredicted RBP23.73■■□□□ 1.39
SPHK1-202ENST00000392496 PTPN21Q16825 1174 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 LBX2Q6XYB7 198 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.73■■□□□ 1.39
SPHK1-202ENST00000392496 MB21D1Q8N884 522 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 CCDC112Q8NEF3 446 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 CHST13Q8NET6 341 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 NACC1Q96RE7 527 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 BHMT2Q9H2M3 363 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 TAB2Q9NYJ8 693 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 KCNH4Q9UQ05 1017 aa23.73■■□□□ 1.39
SPHK1-202ENST00000392496 ITIH6Q6UXX5 1313 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 IRF6O14896 467 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 PPIL2Q13356 520 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 HERC4Q5GLZ8 1057 aaPredicted RBP23.72■■□□□ 1.39
SPHK1-202ENST00000392496 GADL1Q6ZQY3 521 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 VSIG10LQ86VR7 867 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 NSUN6Q8TEA1 469 aaKnown RBP23.72■■□□□ 1.39
SPHK1-202ENST00000392496 OTUD5Q96G74 571 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 CLMNQ96JQ2 1002 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 VPS16Q9H269 839 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 CYP39A1Q9NYL5 469 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 LOXHD1Q8IVV2 1947 aa23.72■■□□□ 1.39
SPHK1-202ENST00000392496 KIF20AO95235 890 aa23.71■■□□□ 1.39
SPHK1-202ENST00000392496 FGFR1OPO95684 399 aaKnown RBP23.71■■□□□ 1.39
SPHK1-202ENST00000392496 ITGB3BPQ13352 177 aaPredicted RBP23.71■■□□□ 1.39
SPHK1-202ENST00000392496 PLS1Q14651 629 aa23.71■■□□□ 1.39
SPHK1-202ENST00000392496 ARMC9Q7Z3E5 817 aa23.71■■□□□ 1.39
SPHK1-202ENST00000392496 MIER3Q7Z3K6 550 aa23.71■■□□□ 1.39
SPHK1-202ENST00000392496 ZNF784Q8NCA9 323 aaPredicted RBP23.71■■□□□ 1.39
SPHK1-202ENST00000392496 KCNJ6P48051 423 aa23.7■■□□□ 1.39
SPHK1-202ENST00000392496 MOB2Q70IA6 237 aa23.7■■□□□ 1.39
SPHK1-202ENST00000392496 PURBQ96QR8 312 aaKnown RBP23.7■■□□□ 1.39
SPHK1-202ENST00000392496 TSG101Q99816 390 aa23.7■■□□□ 1.39
SPHK1-202ENST00000392496 REEP2Q9BRK0 252 aa23.7■■□□□ 1.39
SPHK1-202ENST00000392496 A1CFQ9NQ94 594 aaKnown RBP23.7■■□□□ 1.39
SPHK1-202ENST00000392496 MAFGO15525 162 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 NR3C2P08235 984 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 CACNB1Q02641 598 aaPredicted RBP23.7■■□□□ 1.38
SPHK1-202ENST00000392496 LRRC41Q15345 812 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 RINT1Q6NUQ1 792 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 GPRASP2Q96D09 838 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 TMX1Q9H3N1 280 aa23.7■■□□□ 1.38
SPHK1-202ENST00000392496 DDX39AO00148 427 aaKnown RBP23.69■■□□□ 1.38
SPHK1-202ENST00000392496 RAD51AP2Q09MP3 1159 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 NLRX1Q86UT6 975 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 CREBRFQ8IUR6 639 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 GLIS3Q8NEA6 775 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 PIGOQ8TEQ8 1089 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 CNOT6LQ96LI5 555 aaKnown RBP23.69■■□□□ 1.38
SPHK1-202ENST00000392496 LXNQ9BS40 222 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 KCND1Q9NSA2 647 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 PKD2L1Q9P0L9 805 aa23.69■■□□□ 1.38
SPHK1-202ENST00000392496 LGALS16A8MUM7 142 aa23.68■■□□□ 1.38
SPHK1-202ENST00000392496 P4HBP07237 508 aaKnown RBP23.68■■□□□ 1.38
SPHK1-202ENST00000392496 CHADLQ6NUI6 762 aa23.68■■□□□ 1.38
SPHK1-202ENST00000392496 RIOX2Q8IUF8 465 aa23.68■■□□□ 1.38
SPHK1-202ENST00000392496 RUSC1Q9BVN2 902 aa23.68■■□□□ 1.38
SPHK1-202ENST00000392496 KCND2Q9NZV8 630 aa23.68■■□□□ 1.38
SPHK1-202ENST00000392496 FBXO40Q9UH90 709 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms