RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KPNA7A9QM74 516 aa15.84■□□□□ 0.13
CCDC50-201ENST00000392455 CASP14P31944 242 aa15.84■□□□□ 0.13
CCDC50-201ENST00000392455 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
CCDC50-201ENST00000392455 RSRC2Q7L4I2 434 aaKnown RBP15.84■□□□□ 0.13
CCDC50-201ENST00000392455 KIF19Q2TAC6 998 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 GUCY1A3Q02108 690 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 GCKRQ14397 625 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 GPBP1Q86WP2 473 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 CNBD2Q96M20 576 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 MMS19Q96T76 1030 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 LGR6Q9HBX8 967 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 CSADQ9Y600 493 aa15.83■□□□□ 0.13
CCDC50-201ENST00000392455 MFAP3P55082 362 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 AP1B1Q10567 949 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 ODR4Q5SWX8 454 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 KRT40Q6A162 431 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 RPRD1BQ9NQG5 326 aaKnown RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 DDX28Q9NUL7 540 aaKnown RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 TK2O00142 265 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 MT-ND3P03897 115 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 YWHAHQ04917 246 aaPredicted RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 ANGPTL8Q6UXH0 198 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 GADL1Q6ZQY3 521 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 TRIM69Q86WT6 500 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 U2AF1L4Q8WU68 220 aaKnown RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF274Q96GC6 653 aaPredicted RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 NLRC4Q9NPP4 1024 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 CAB39Q9Y376 341 aaPredicted RBP15.83■□□□□ 0.12
CCDC50-201ENST00000392455 E7EWF7 191 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 KRT37O76014 449 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 RMDN2Q96LZ7 410 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 USP19O94966 1318 aa15.83■□□□□ 0.12
CCDC50-201ENST00000392455 PPARAQ07869 468 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 GCOM2Q9BZD3 368 aaPredicted RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 GUCY2CP25092 1073 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 TECP42680 631 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 SERPINB4P48594 390 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 KCNJ12Q14500 433 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 CMTR1Q8N1G2 835 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 UVRAGQ9P2Y5 699 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ATP10BO94823 1461 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ABCB4P21439 1286 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 DHX9Q08211 1270 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 DEPDC1Q5TB30 811 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 TNIP2Q8NFZ5 429 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 PLEKHG3A1L390 1219 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 JAK2O60674 1132 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF445P59923 1031 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 RBM6P78332 1123 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 TRADDQ15628 312 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 TTBK2Q6IQ55 1244 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ZC3H18Q86VM9 953 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 DEPDC1BQ8WUY9 529 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF229Q9UJW7 825 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 KCNA6P17658 529 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 ARPP21Q9UBL0 812 aaPredicted RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 LZTS3O60299 673 aaPredicted RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 NOP9Q86U38 636 aaKnown RBP15.82■□□□□ 0.12
CCDC50-201ENST00000392455 TBC1D23Q9NUY8 699 aa15.82■□□□□ 0.12
CCDC50-201ENST00000392455 RUNX1T1Q06455 604 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 SPOPLQ6IQ16 392 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 ANKS3Q6ZW76 656 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 MTRF1O75570 445 aaKnown RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 LIG3P49916 1009 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 CTSWP56202 376 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 RWDD2BP57060 319 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 GTF2IP78347 998 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 TP53BP2Q13625 1128 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 CENPUQ71F23 418 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 BIRC5O15392 142 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 SNX2O60749 519 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 HOMEZQ8IX15 550 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 DCLK2Q8N568 766 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 TCP11Q8WWU5 503 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 APOBEC2Q9Y235 224 aaKnown RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 GADD45BO75293 160 aaPredicted RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 FAM178BQ8IXR5 827 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 APOA4P06727 396 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 H2AFZP0C0S5 128 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 H2AFVQ71UI9 128 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF280CQ8ND82 737 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 CARD14Q9BXL6 1004 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 TRIM54Q9BYV2 358 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 SGSM2O43147 1006 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 CEP78Q5JTW2 689 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 MFSD14BQ5SR56 506 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 EML4Q9HC35 981 aaKnown RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 PODXLO00592 558 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 ADKP55263 362 aaKnown RBP15.81■□□□□ 0.12
CCDC50-201ENST00000392455 SPARCL1Q14515 664 aa15.81■□□□□ 0.12
CCDC50-201ENST00000392455 C16orf62Q7Z3J2 963 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms