RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 UTYO14607 1347 aa2.96□□□□□ -1.93
TRAV41-201ENST00000390468 ZNF646O15015 1829 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SLX4Q8IY92 1834 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ATAD5Q96QE3 1844 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SYCE3A1L190 88 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CHUKO15111 745 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 POLR3GO15318 223 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SMARCA5O60264 1052 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 NEMFO60524 1076 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ICMTO60725 284 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 RAB11FIP3O75154 756 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 PHACTR2O75167 634 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 RPS6KA5O75582 802 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SURF6O75683 361 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 KIAA0754O94854 1291 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 PAPLNO95428 1278 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 IGKV5-2P06315 115 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 MYBL2P10244 700 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 VDRP11473 427 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ADH5P11766 374 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 YY1P25490 414 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 HMGB2P26583 209 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 MAPK1P28482 360 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 DDIT3P35638 169 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 GJA8P48165 433 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CLNS1AP54105 237 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SLC8A3P57103 927 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 FKBP4Q02790 459 aaKnown RBP eCLIP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SOX4Q06945 474 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 BNIP3Q12983 259 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 G3BP1Q13283 466 aaKnown RBP eCLIP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ZNF211Q13398 564 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SF3B2Q13435 895 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 TCIRG1Q13488 830 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ITPK1Q13572 414 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CPSF6Q16630 551 aaKnown RBP eCLIP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 TPD52L1Q16890 204 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 INF2Q27J81 1249 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SLC5A9Q2M3M2 681 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ZNF792Q3KQV3 632 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 LONRF3Q496Y0 759 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 LRRC23Q53EV4 343 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC92Q53HC0 331 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 EXOSC6Q5RKV6 272 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 MFSD4BQ5TF39 518 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 RCSD1Q6JBY9 416 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC80Q76M96 950 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 UBE3BQ7Z3V4 1068 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 APBB1IPQ7Z5R6 666 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 KSR1Q8IVT5 923 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ZSCAN29Q8IWY8 852 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SIRT2Q8IXJ6 389 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 STK11IPQ8N1F8 1099 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 TMEM102Q8N9M5 508 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 TDRD7Q8NHU6 1098 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CTCFLQ8NI51 663 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 KIAA1524Q8TCG1 905 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 BICD2Q8TD16 824 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 GPT2Q8TD30 523 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SSH3Q8TE77 659 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 FBXO41Q8TF61 875 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 GTF3C2Q8WUA4 911 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 NUP133Q8WUM0 1156 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 GTF3C6Q969F1 213 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 NXPE3Q969Y0 559 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SAAL1Q96ER3 474 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 THOC1Q96FV9 657 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 GPATCH3Q96I76 525 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SUCLG2Q96I99 432 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 FAXDC2Q96IV6 333 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CABS1Q96KC9 395 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 RUFY1Q96T51 708 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 MPHOSPH6Q99547 160 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ARPC5LQ9BPX5 153 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ISCA1Q9BUE6 129 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 POLR3CQ9BUI4 534 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 MAF1Q9H063 256 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CHRDQ9H2X0 955 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 UNC45AQ9H3U1 944 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ZSCAN16Q9H4T2 348 aaPredicted RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 BICC1Q9H694 974 aaKnown RBP2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SUN2Q9UH99 717 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ITGB1BP2Q9UKP3 347 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 ODF2LQ9ULJ1 636 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 SBF1O95248 1867 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 FER1L6Q2WGJ9 1857 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 LTBP1Q14766 1721 aa2.96□□□□□ -1.94
TRAV41-201ENST00000390468 CDHR2Q9BYE9 1310 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ZNF609O15014 1411 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ERVV-1B6SEH8 477 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 BIN1O00499 593 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ERC2O15083 957 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 NPHP1O15259 732 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 DYNC1LI2O43237 492 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CEP104O60308 925 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PRPF40AO75400 957 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 E2F6O75461 281 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 TRIM37O94972 964 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ADCY5O95622 1261 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms