RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 CD302Q8IX05 232 aa16.98■□□□□ 0.31
LRCH1-202ENST00000389797 TBC1D16Q8TBP0 767 aa16.98■□□□□ 0.31
LRCH1-202ENST00000389797 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
LRCH1-202ENST00000389797 KRT12Q99456 494 aa16.98■□□□□ 0.31
LRCH1-202ENST00000389797 ATXN2Q99700 1313 aaKnown RBP16.97■□□□□ 0.31
LRCH1-202ENST00000389797 ZSCAN5CA6NGD5 496 aaPredicted RBP16.97■□□□□ 0.31
LRCH1-202ENST00000389797 TRAF5O00463 557 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 FTCDO95954 541 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 LSP1P33241 339 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
LRCH1-202ENST00000389797 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 NR1D1P20393 614 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 EPN3Q9H201 632 aa16.97■□□□□ 0.31
LRCH1-202ENST00000389797 GEMIN8Q9NWZ8 242 aaKnown RBP16.97■□□□□ 0.31
LRCH1-202ENST00000389797 ESYT2A0FGR8 921 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 APBA3O96018 575 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 SMARCA1P28370 1054 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 POLR2FP61218 127 aaKnown RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 TNNC1P63316 161 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 PDIA5Q14554 519 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 PIGSQ96S52 555 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 TLR2O60603 784 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 KLRC1P26715 233 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 GSTO1P78417 241 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 LSM14BQ9BX40 385 aaKnown RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 TMEM260Q9NX78 707 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 EHHADHQ08426 723 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 SLC18A3Q16572 532 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 SWT1Q5T5J6 900 aaKnown RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 FBXW10Q5XX13 1052 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 C1orf131Q8NDD1 294 aaKnown RBP16.96■□□□□ 0.31
LRCH1-202ENST00000389797 CASKIN2Q8WXE0 1202 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 ATP6V1G3Q96LB4 118 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 EYA3Q99504 573 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 PRDM16Q9HAZ2 1276 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 PCDHGC5Q9Y5F6 944 aa16.96■□□□□ 0.31
LRCH1-202ENST00000389797 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 POTEMA6NI47 508 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 H0YHG0 523 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 PPP1R37O75864 691 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 TAF4BQ92750 862 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 INPP4AQ96PE3 977 aaPredicted RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 CAPN7Q9Y6W3 813 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 NOL4O94818 638 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 GUCY1A3Q02108 690 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 GLIS3Q8NEA6 775 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 GOLGA6L10A6NI86 522 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 RAPGEF1Q13905 1077 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■■■□ 25
LRCH1-202ENST00000389797 PIK3R5Q8WYR1 880 aa16.95■□□□□ 0.3
LRCH1-202ENST00000389797 BMP2KQ9NSY1 1161 aaPredicted RBP16.95■□□□□ 0.3
LRCH1-202ENST00000389797 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
LRCH1-202ENST00000389797 GNA14O95837 355 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 LDHCP07864 332 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 MNAT1P51948 309 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
LRCH1-202ENST00000389797 PPP4CP60510 307 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 KLHL30Q0D2K2 578 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 SEPT2Q15019 361 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.94■□□□□ 0.3
LRCH1-202ENST00000389797 SLC37A4O43826 429 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 TDP2O95551 362 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 ARID5AQ03989 594 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 FAM26FQ5R3K3 315 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 NAA35Q5VZE5 725 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
LRCH1-202ENST00000389797 hCG_1984214I3L0E3 225 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
LRCH1-202ENST00000389797 MDH1P40925 334 aaKnown RBP16.93■□□□□ 0.3
LRCH1-202ENST00000389797 CDK8P49336 464 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 COASYQ13057 564 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 HLTFQ14527 1009 aaKnown RBP eCLIP16.93■□□□□ 0.3
LRCH1-202ENST00000389797 PTGISQ16647 500 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 KCNK18Q7Z418 384 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 ARFGAP2Q8N6H7 521 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 ZNF713Q8N859 430 aaPredicted RBP16.93■□□□□ 0.3
LRCH1-202ENST00000389797 USP38Q8NB14 1042 aa16.93■□□□□ 0.3
LRCH1-202ENST00000389797 NUDT12Q9BQG2 462 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms