RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SLC30A10Q6XR72 485 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 TC2NQ8N9U0 490 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 KRT12Q99456 494 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 MOCS3O95396 460 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 CTNNA1P35221 906 aaKnown RBP20.63■□□□□ 0.89
CSPG5-202ENST00000383738 TRAPPC10P48553 1259 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 ADAM9Q13443 819 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 KRT31Q15323 416 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 POTEB3A0JP26 581 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 POTECB2RU33 542 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 TNNI1P19237 187 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 ARHGAP4P98171 946 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 POTEBQ6S5H4 581 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 ABCB11O95342 1321 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 FXR1P51114 621 aaKnown RBP eCLIP20.62■□□□□ 0.89
CSPG5-202ENST00000383738 SARNPP82979 210 aaKnown RBP20.62■□□□□ 0.89
CSPG5-202ENST00000383738 MCF2L2Q86YR7 1114 aa20.62■□□□□ 0.89
CSPG5-202ENST00000383738 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
CSPG5-202ENST00000383738 SEPT9Q9UHD8 586 aaPredicted RBP20.62■□□□□ 0.89
CSPG5-202ENST00000383738 A0A0U1RQJ8 604 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 PDHBP11177 359 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 DISP2A7MBM2 1401 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 STRN3Q13033 797 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 SLFN12Q8IYM2 578 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 NFU1Q9UMS0 254 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 CTNNA2P26232 953 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 TNNC1P63316 161 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 MMS19Q96T76 1030 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 RTFDC1Q9BY42 306 aaPredicted RBP20.61■□□□□ 0.89
CSPG5-202ENST00000383738 SAMD15Q9P1V8 674 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 ANKFY1Q9P2R3 1169 aa20.61■□□□□ 0.89
CSPG5-202ENST00000383738 POTEFA5A3E0 1075 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 ATP1A1P05023 1023 aaKnown RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 ADCY1Q08828 1119 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 POTEGQ6S5H5 508 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 POTEEQ6S8J3 1075 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 RNF207Q6ZRF8 634 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 KIRREL3Q8IZU9 778 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 NOX5Q96PH1 765 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 ELP3Q9H9T3 547 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 KCNK3O14649 394 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 FTCDO95954 541 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 PAK2Q13177 524 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 MTERF2Q49AM1 385 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 CFAP221Q4G0U5 840 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 MYOZ2Q9NPC6 264 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 ABT1Q9ULW3 272 aaKnown RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 PRPF6O94906 941 aaKnown RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 VEGFAP15692 232 aaPredicted RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 ZNF543Q08ER8 600 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 PROCA1Q8NCQ7 364 aaPredicted RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 HEXIM1O94992 359 aaKnown RBP20.6■□□□□ 0.89
CSPG5-202ENST00000383738 TRIM14Q14142 442 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 DAAM2Q86T65 1068 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 PACS2Q86VP3 889 aa20.6■□□□□ 0.89
CSPG5-202ENST00000383738 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 GUCY1A3Q02108 690 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 CCDC6Q16204 474 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 SBK1Q52WX2 424 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 CEP170P1Q96L14 293 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 NCAPGQ9BPX3 1015 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 EHD4Q9H223 541 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 RGL1Q9NZL6 768 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 LARSQ9P2J5 1176 aaKnown RBP20.59■□□□□ 0.89
CSPG5-202ENST00000383738 C16orf86Q6ZW13 317 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 DISC1Q9NRI5 854 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 RNF146Q9NTX7 359 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 ARMCX3Q9UH62 379 aaPredicted RBP20.59■□□□□ 0.89
CSPG5-202ENST00000383738 MYO3BQ8WXR4 1341 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 MYO1FO00160 1098 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 HHIPL2Q6UWX4 724 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 USP37Q86T82 979 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 GSDMAQ96QA5 445 aa20.59■□□□□ 0.89
CSPG5-202ENST00000383738 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.59■□□□□ 0.89
CSPG5-202ENST00000383738 PLA2G4BP0C869 781 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 ABCB4P21439 1286 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 OSTNP61366 133 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 FBF1Q8TES7 1133 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 TMEM60Q9H2L4 133 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 IREB2P48200 963 aaKnown RBP20.58■□□□□ 0.89
CSPG5-202ENST00000383738 HIBCHQ6NVY1 386 aaPredicted RBP20.58■□□□□ 0.89
CSPG5-202ENST00000383738 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
CSPG5-202ENST00000383738 NCK2O43639 380 aa20.58■□□□□ 0.88
CSPG5-202ENST00000383738 DDNO94850 711 aaPredicted RBP20.58■□□□□ 0.88
CSPG5-202ENST00000383738 NR2F2P24468 414 aa20.58■□□□□ 0.88
CSPG5-202ENST00000383738 POLGP54098 1239 aaPredicted RBP20.58■□□□□ 0.88
CSPG5-202ENST00000383738 TUBGCP2Q9BSJ2 902 aa20.58■□□□□ 0.88
CSPG5-202ENST00000383738 RPAP3Q9H6T3 665 aaPredicted RBP20.58■□□□□ 0.88
CSPG5-202ENST00000383738 LRRIQ3A6PVS8 624 aaPredicted RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 USP14P54578 494 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 STYK1Q6J9G0 422 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CACNA2D3Q8IZS8 1091 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CCDC51Q96ER9 411 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CNOT6LQ96LI5 555 aaKnown RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CD2APQ9Y5K6 639 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 RESP18Q5W5W9 173 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms