RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 QRICH1Q2TAL8 776 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 MICALCLQ6ZW33 695 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 CNPY4Q8N129 248 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 STAMQ92783 540 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 ZBTB9Q96C00 473 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 DHTKD1Q96HY7 919 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 ALS2CR12Q96Q35 445 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 PAGR1Q9BTK6 254 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 DISC1Q9NRI5 854 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 BICDL2A1A5D9 508 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 NFKBIEO00221 500 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 ZMYND10O75800 440 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 HNRNPH3P31942 346 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 LIG3P49916 1009 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 TNIP1Q15025 636 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 CDC37Q16543 378 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 EMC10Q5UCC4 262 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 PRPF38AQ8NAV1 312 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 SPATA4Q8NEY3 305 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 PSTPIP2Q9H939 334 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 MAGEF1Q9HAY2 307 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 A1CFQ9NQ94 594 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 STIM2Q9P246 746 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 SRRM3A6NNA2 597 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 PES1O00541 588 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 RHOBTB3O94955 611 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 BMP3P12645 472 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 TNNI2P48788 182 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 C2orf54Q08AI8 447 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 BTNL9Q6UXG8 535 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 GIMAP8Q8ND71 665 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 C1orf131Q8NDD1 294 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 CCDC42Q96M95 316 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 TUBGCP2Q9BSJ2 902 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 RNF14Q9UBS8 474 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 GDAQ9Y2T3 454 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 PCDHA1Q9Y5I3 950 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 CD2APQ9Y5K6 639 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 A0A1W2PRG0 241 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 PP2D1A8MPX8 630 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 WNT10BO00744 389 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 ZNF185O15231 689 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 COBLO75128 1261 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 HNRNPH1P31943 449 aaKnown RBP9.85□□□□□ -0.83
GPNMB-202ENST00000381990 UBE2SQ16763 222 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 SYDE2Q5VT97 1194 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 GSPT2Q8IYD1 628 aaKnown RBP9.85□□□□□ -0.83
GPNMB-202ENST00000381990 RASSF8Q8NHQ8 419 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 KAT2BQ92831 832 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 MTMR9Q96QG7 549 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 ERGIC2Q96RQ1 377 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 TMEM39BQ9GZU3 492 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 CUEDC2Q9H467 287 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
GPNMB-202ENST00000381990 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 GGA2Q9UJY4 613 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 ZBTB21Q9ULJ3 1066 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 HYOU1Q9Y4L1 999 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 NDUFAB1O14561 156 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 FSBPO95073 299 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 RPS12P25398 132 aaKnown RBP9.85□□□□□ -0.83
GPNMB-202ENST00000381990 PAFAH1B1P43034 410 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 MNAT1P51948 309 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 TBC1D8BQ0IIM8 1120 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 CALCRLQ16602 461 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 NAALADL2Q58DX5 795 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 PPP4R3AQ6IN85 833 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 TTI2Q6NXR4 508 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 CABP7Q86V35 215 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 MYOZ2Q9NPC6 264 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 AGPAT5Q9NUQ2 364 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 PLAGL2Q9UPG8 496 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 LTBP3Q9NS15 1303 aa9.85□□□□□ -0.83
GPNMB-202ENST00000381990 MACROD2A1Z1Q3 448 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 TRIM49BA6NDI0 452 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 MYH7BA7E2Y1 1941 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 B4DLN1 442 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 EDIL3O43854 480 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 LCA5LO95447 670 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 GCFC2P16383 781 aaKnown RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 ZNF280AP59817 542 aaPredicted RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 IKQ13123 557 aaPredicted RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 R3HDM1Q15032 1099 aaKnown RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 NBPF9Q3BBW0 867 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 CSGALNACT2Q8N6G5 542 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 CCDC47Q96A33 483 aaKnown RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 CABS1Q96KC9 395 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 NAP1L4Q99733 375 aaKnown RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 SGIP1Q9BQI5 828 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 LRRC1Q9BTT6 524 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms