RNA–Protein interactions for RNA: ENST00000381582.3

GABRB1-202, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 2

Gene GABRB1, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-202ENST00000381582 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
GABRB1-202ENST00000381582 TBX21Q9UL17 535 aa17.51■□□□□ 0.39
GABRB1-202ENST00000381582 GRIN2DO15399 1336 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 NRCAMQ92823 1304 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 C17orf102A2RUQ5 167 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 RRN3P2A6NIE6 340 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 B4GALT4O60513 344 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 DKC1O60832 514 aaKnown RBP eCLIP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 GAS7O60861 476 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PSAPP07602 524 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PFKMP08237 780 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 ZNF286BP0CG31 522 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PTGS1P23219 599 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 RFC2P35250 354 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 MAGEA10P43363 369 aaPredicted RBP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 JAK3P52333 1124 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 ACTR2P61160 394 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 FPGSQ05932 587 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 NPY5RQ15761 445 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PTGISQ16647 500 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 INF2Q27J81 1249 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 LETM2Q2VYF4 491 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 SLFN12Q8IYM2 578 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 CYP2W1Q8TAV3 490 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
GABRB1-202ENST00000381582 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
GABRB1-202ENST00000381582 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 CAND2O75155 1236 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 ATG7O95352 703 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 PDCP20941 246 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 STAT5BP51692 787 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 PTK7Q13308 1070 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 LRCH2Q5VUJ6 765 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 SAMM50Q9Y512 469 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 PCDHA10Q9Y5I2 948 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 SCN10AQ9Y5Y9 1956 aa17.49■□□□□ 0.39
GABRB1-202ENST00000381582 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 TRIM43BA6NCK2 446 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 BACH1O14867 736 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 SORBS3O60504 671 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 CCNT1O60563 726 aaKnown RBP17.48■□□□□ 0.39
GABRB1-202ENST00000381582 LGR5O75473 907 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
GABRB1-202ENST00000381582 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 AFAP1L1Q8TED9 768 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
GABRB1-202ENST00000381582 FAM167AQ96KS9 214 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 ALPK3Q96L96 1907 aa17.48■□□□□ 0.39
GABRB1-202ENST00000381582 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 H3BQV1 296 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 MDM2Q00987 491 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-202ENST00000381582 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-202ENST00000381582 TAF2Q6P1X5 1199 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 PSRC1Q6PGN9 363 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-202ENST00000381582 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-202ENST00000381582 RSPH3Q86UC2 560 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 SLC5A5Q92911 643 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 BADQ92934 168 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 TRPV6Q9H1D0 765 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
GABRB1-202ENST00000381582 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 MSH4O15457 936 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 HBP1O60381 514 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 RBL2Q08999 1139 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 ABHD15Q6UXT9 468 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 TDHQ8IZJ6 230 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 LENG9Q96B70 501 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 INTS4Q96HW7 963 aaKnown RBP17.46■□□□□ 0.39
GABRB1-202ENST00000381582 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
GABRB1-202ENST00000381582 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
GABRB1-202ENST00000381582 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
GABRB1-202ENST00000381582 COLQQ9Y215 455 aaPredicted RBP17.46■□□□□ 0.39
GABRB1-202ENST00000381582 IGKV6D-21A0A0A0MT36 114 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
GABRB1-202ENST00000381582 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
GABRB1-202ENST00000381582 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 NR5A1Q13285 461 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
GABRB1-202ENST00000381582 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 CKAP2LQ8IYA6 745 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 OXER1Q8TDS5 423 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
GABRB1-202ENST00000381582 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms