RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 MYL3P08590 195 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 AP1B1Q10567 949 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 GPBP1Q86WP2 473 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PIK3CAP42336 1068 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 TUBA1BP68363 451 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 DAB2P98082 770 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 CDR2Q01850 454 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 KCTD1Q719H9 257 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 TUBA1AQ71U36 451 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 OTUD6AQ7L8S5 288 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 CNBD2Q96M20 576 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 ADPGKQ9BRR6 497 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 AP5M1Q9H0R1 490 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 TNNC2P02585 160 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 BCAMP50895 628 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PDCLQ13371 301 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 TNNI3KQ59H18 835 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 CEP78Q5JTW2 689 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 NLRP14Q86W24 1093 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 KRT12Q99456 494 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 FPGT-TNNI3KV9GXZ4 949 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 MAP3K5Q99683 1374 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 MSL3P1P0C860 447 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 CERKLQ49MI3 558 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 DLGAP2Q9P1A6 1054 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 TCP1P17987 556 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 GRK2P25098 689 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 PLCD1P51178 756 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 STX1BP61266 288 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 HABP4Q5JVS0 413 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 QKIQ96PU8 341 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 IL1RAPL1Q9NZN1 696 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 ZFATQ9P243 1243 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 ALDH1L1O75891 902 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 P4HA1P13674 534 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 PAX3P23760 479 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 NAA35Q5VZE5 725 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 ZBTB8OSQ8IWT0 167 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 NELFBQ8WX92 580 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 XPO4Q9C0E2 1151 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 MAST3O60307 1309 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 VIL1P09327 827 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 FSCBQ5H9T9 825 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 RAPH1Q70E73 1250 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 BHMTQ93088 406 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 TMEM60Q9H2L4 133 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 PLEKHG3A1L390 1219 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 GOLGA8CPA6NN73 597 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 LRPAP1P30533 357 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 DEFA1P59665 94 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 DEFA3P59666 94 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 SMAD1Q15797 465 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 C1orf228Q6PIY5 440 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 E7ENQ6 273 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 MYBP10242 640 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 DIS3L2Q8IYB7 885 aaKnown RBP11.6□□□□□ -0.55
CLCN4-202ENST00000380833 EXT2Q93063 718 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 HACD3Q9P035 362 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
CLCN4-202ENST00000380833 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 TRIM39Q9HCM9 518 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 F5H423 210 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 DEXIO95424 95 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 KLC3Q6P597 504 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 FAM149B1Q96BN6 582 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 MIEF2Q96C03 454 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SNX5Q9Y5X3 404 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SUPT6HQ7KZ85 1726 aaKnown RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 CAPN15O75808 1086 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SLC16A2P36021 539 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 DYNLT1P63172 113 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PAK1Q13153 545 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ANGPTL8Q6UXH0 198 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PI4K2BQ8TCG2 481 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 GYG2O15488 501 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 SCARA5Q6ZMJ2 495 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms