RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 WDR18Q9BV38 432 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 FGFBP2Q9BYJ0 223 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 DEFB129Q9H1M3 183 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 ATAD5Q96QE3 1844 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 ZNF541Q9H0D2 1346 aa15.81■□□□□ 0.12
CLCN4-201ENST00000380829 FZD9O00144 591 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 NBPF12Q5TAG4 269 aaPredicted RBP15.8■□□□□ 0.12
CLCN4-201ENST00000380829 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
CLCN4-201ENST00000380829 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 ARFGAP3Q9NP61 516 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 VPS18Q9P253 973 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 VAV3Q9UKW4 847 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 ATP8B1O43520 1251 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 SPATA31C1P0DKV0 1188 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 CYP11B2P19099 503 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 GUCY2CP25092 1073 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 PTGER2P43116 358 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
CLCN4-201ENST00000380829 PRAMEF18Q5VWM3 479 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 RAD9BQ6WBX8 426 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 BMP2KQ9NSY1 1161 aaPredicted RBP15.8■□□□□ 0.12
CLCN4-201ENST00000380829 CCPG1Q9ULG6 757 aa15.8■□□□□ 0.12
CLCN4-201ENST00000380829 EML1O00423 815 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 PSEN1P49768 467 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLCN4-201ENST00000380829 LEKR1Q6ZMV7 388 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
CLCN4-201ENST00000380829 PARD6BQ9BYG5 372 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 ABHD10Q9NUJ1 306 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 FZD1Q9UP38 647 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
CLCN4-201ENST00000380829 ERCC3P19447 782 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 RPA1P27694 616 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 SLC12A3P55017 1021 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 PSMD2Q13200 908 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 FAM26FQ5R3K3 315 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 FAM114A1Q8IWE2 563 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 MYCBPQ99417 103 aaPredicted RBP15.79■□□□□ 0.12
CLCN4-201ENST00000380829 TANGO6Q9C0B7 1094 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 ZHX3Q9H4I2 956 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 PLEKHA4Q9H4M7 779 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 ZNF536O15090 1300 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 ABCB11O95342 1321 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 LTBP3Q9NS15 1303 aa15.79■□□□□ 0.12
CLCN4-201ENST00000380829 CHMP2AO43633 222 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 MTMR2Q13614 643 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 ARSHQ5FYA8 562 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 CPXCR1Q8N123 301 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 HOOK2Q96ED9 719 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 NOC4LQ9BVI4 516 aaKnown RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 TTC26A0AVF1 554 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 WDR46O15213 610 aaKnown RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 CTNND1O60716 968 aaKnown RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 ICAM1P05362 532 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 KRT9P35527 623 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 KLK7P49862 253 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 TRIM14Q14142 442 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 HERC4Q5GLZ8 1057 aaPredicted RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 MIIPQ5JXC2 388 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 PRPF38AQ8NAV1 312 aaKnown RBP15.78■□□□□ 0.12
CLCN4-201ENST00000380829 HOMER2Q9NSB8 354 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 DNM3Q9UQ16 869 aa15.78■□□□□ 0.12
CLCN4-201ENST00000380829 EIF3CLB5ME19 914 aaKnown RBP15.77■□□□□ 0.12
CLCN4-201ENST00000380829 NFIBO00712 420 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 N4BP1O75113 896 aaKnown RBP15.77■□□□□ 0.12
CLCN4-201ENST00000380829 DNM2P50570 870 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 TBC1D8BQ0IIM8 1120 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 LRCH2Q5VUJ6 765 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 CCDC51Q96ER9 411 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 WDR24Q96S15 920 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 EIF3CQ99613 913 aaKnown RBP15.77■□□□□ 0.12
CLCN4-201ENST00000380829 EIF2AK1Q9BQI3 630 aaKnown RBP15.77■□□□□ 0.12
CLCN4-201ENST00000380829 KIAA1683Q9H0B3 1180 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 ZSWIM4Q9H7M6 989 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 PDE11AQ9HCR9 933 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 PSD3Q9NYI0 1048 aa15.77■□□□□ 0.12
CLCN4-201ENST00000380829 A0A0U1RQJ8 604 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 A0A1W2PQC6 194 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 SLC26A4O43511 780 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 MAGEA9P43362 315 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 ERVK-24P63145 666 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 GPR161Q8N6U8 529 aaKnown RBP15.77■□□□□ 0.11
CLCN4-201ENST00000380829 ATRIPQ8WXE1 791 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 LPAR1Q92633 364 aa15.77■□□□□ 0.11
CLCN4-201ENST00000380829 MRPL44Q9H9J2 332 aaKnown RBP15.77■□□□□ 0.11
CLCN4-201ENST00000380829 RAVER2Q9HCJ3 691 aaKnown RBP15.77■□□□□ 0.11
CLCN4-201ENST00000380829 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms