RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 SPTLC3Q9NUV7 552 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 DHX15O43143 795 aaKnown RBP23.91■■□□□ 1.42
GMDS-202ENST00000380815 CCZ1BP86790 482 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 CCZ1P86791 482 aaPredicted RBP23.91■■□□□ 1.42
GMDS-202ENST00000380815 TBX2Q13207 712 aaPredicted RBP23.91■■□□□ 1.42
GMDS-202ENST00000380815 FAM26FQ5R3K3 315 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 ANKRD40Q6AI12 368 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 FOXR2Q6PJQ5 311 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 LBX2Q6XYB7 198 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 CSGALNACT2Q8N6G5 542 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 MB21D1Q8N884 522 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 DYDC2Q96IM9 177 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 SRRTQ9BXP5 876 aaKnown RBP23.91■■□□□ 1.42
GMDS-202ENST00000380815 KCNH4Q9UQ05 1017 aa23.91■■□□□ 1.42
GMDS-202ENST00000380815 LOC285556D6RIA3 1793 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 KRT18P05783 430 aaKnown RBP23.9■■□□□ 1.42
GMDS-202ENST00000380815 SKILP12757 684 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 PPIL2Q13356 520 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 CTTNQ14247 550 aaKnown RBP23.9■■□□□ 1.42
GMDS-202ENST00000380815 PLS1Q14651 629 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 MOB2Q70IA6 237 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 TPH2Q8IWU9 490 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 NEK9Q8TD19 979 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 BHMT2Q9H2M3 363 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 TBC1D22BQ9NU19 505 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 CYP39A1Q9NYL5 469 aa23.9■■□□□ 1.42
GMDS-202ENST00000380815 MYCLP12524 364 aaPredicted RBP23.89■■□□□ 1.42
GMDS-202ENST00000380815 PBX1P40424 430 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 ARMC9Q7Z3E5 817 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 VSIG10LQ86VR7 867 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 CHST13Q8NET6 341 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 NSUN6Q8TEA1 469 aaKnown RBP23.89■■□□□ 1.42
GMDS-202ENST00000380815 SEMA6BQ9H3T3 888 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 A1CFQ9NQ94 594 aaKnown RBP23.89■■□□□ 1.42
GMDS-202ENST00000380815 PCDHA2Q9Y5H9 948 aa23.89■■□□□ 1.42
GMDS-202ENST00000380815 NPHP3-ACAD11A0A0J9YXS1 232 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 TEX33O43247 280 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 CCND2P30279 289 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 COPB1P53618 953 aaKnown RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 ITGB3BPQ13352 177 aaPredicted RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 GIT2Q14161 759 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 GADL1Q6ZQY3 521 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 MYOCDQ8IZQ8 938 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 PURBQ96QR8 312 aaKnown RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 NACC1Q96RE7 527 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 N4BP3O15049 544 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 NR3C2P08235 984 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 LRRC63Q05C16 580 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 HERC4Q5GLZ8 1057 aaPredicted RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 FAM114A1Q8IWE2 563 aa23.88■■□□□ 1.41
GMDS-202ENST00000380815 C17orf53Q8N3J3 647 aaPredicted RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 MAGEC2Q9UBF1 373 aaPredicted RBP23.88■■□□□ 1.41
GMDS-202ENST00000380815 A0A0G2JMZ2 1700 aa23.87■■□□□ 1.41
GMDS-202ENST00000380815 PTPN21Q16825 1174 aa23.87■■□□□ 1.41
GMDS-202ENST00000380815 REEP2Q9BRK0 252 aa23.87■■□□□ 1.41
GMDS-202ENST00000380815 MAFGO15525 162 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 NRDCO43847 1150 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 MIER3Q7Z3K6 550 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 GPRASP2Q96D09 838 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 PKD2L1Q9P0L9 805 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 DDX39AO00148 427 aaKnown RBP23.86■■□□□ 1.41
GMDS-202ENST00000380815 KIF20AO95235 890 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 IRX3P78415 501 aaPredicted RBP23.86■■□□□ 1.41
GMDS-202ENST00000380815 CACNB1Q02641 598 aaPredicted RBP23.86■■□□□ 1.41
GMDS-202ENST00000380815 RAD51AP2Q09MP3 1159 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 LDLRAD1Q5T700 205 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 RIOX2Q8IUF8 465 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 GLIS3Q8NEA6 775 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 CCDC112Q8NEF3 446 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 PIGOQ8TEQ8 1089 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 LXNQ9BS40 222 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 TAB2Q9NYJ8 693 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 FBXO40Q9UH90 709 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 AGTPBP1Q9UPW5 1226 aa23.86■■□□□ 1.41
GMDS-202ENST00000380815 OFD1O75665 1012 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 LRRC41Q15345 812 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 RINT1Q6NUQ1 792 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 NLRX1Q86UT6 975 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 OPTNQ96CV9 577 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 INPP4AQ96PE3 977 aaPredicted RBP23.85■■□□□ 1.41
GMDS-202ENST00000380815 RUSC1Q9BVN2 902 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 VPS16Q9H269 839 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 KCND2Q9NZV8 630 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 BTBD7Q9P203 1132 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 ITIH6Q6UXX5 1313 aa23.85■■□□□ 1.41
GMDS-202ENST00000380815 TESPA1A2RU30 521 aaPredicted RBP23.84■■□□□ 1.41
GMDS-202ENST00000380815 STAM2O75886 525 aa23.84■■□□□ 1.41
GMDS-202ENST00000380815 FGFR1OPO95684 399 aaKnown RBP23.84■■□□□ 1.41
GMDS-202ENST00000380815 P4HBP07237 508 aaKnown RBP23.84■■□□□ 1.41
GMDS-202ENST00000380815 CREBRFQ8IUR6 639 aa23.84■■□□□ 1.41
GMDS-202ENST00000380815 TSG101Q99816 390 aa23.84■■□□□ 1.41
GMDS-202ENST00000380815 WRAP73Q9P2S5 460 aaPredicted RBP23.84■■□□□ 1.41
GMDS-202ENST00000380815 UNCXA6NJT0 531 aa23.83■■□□□ 1.41
GMDS-202ENST00000380815 C1orf186Q6ZWK4 172 aa23.83■■□□□ 1.41
GMDS-202ENST00000380815 FASTKD5Q7L8L6 764 aaKnown RBP23.83■■□□□ 1.41
GMDS-202ENST00000380815 ASCC2Q9H1I8 757 aaPredicted RBP23.83■■□□□ 1.41
GMDS-202ENST00000380815 TMX1Q9H3N1 280 aa23.83■■□□□ 1.41
GMDS-202ENST00000380815 ZSWIM4Q9H7M6 989 aa23.83■■□□□ 1.41
GMDS-202ENST00000380815 ZCWPW2Q504Y3 356 aa23.83■■□□□ 1.4
GMDS-202ENST00000380815 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms