RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PDHA1P08559 390 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 LIFRP42702 1097 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 CDR2Q01850 454 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 ASPRV1Q53RT3 343 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 ODR4Q5SWX8 454 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 A1BGP04217 495 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 S100BP04271 92 aaPredicted RBP18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 XKR9Q5GH70 373 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 RNF207Q6ZRF8 634 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 KSR1Q8IVT5 923 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 FAM187AA6NFU0 413 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 SRGAP2O75044 1071 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 DLATP10515 647 aaKnown RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 NCF2P19878 526 aaPredicted RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 PLCB4Q15147 1175 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 ALKBH5Q6P6C2 394 aaKnown RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 ELF1P32519 619 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 POLA2Q14181 598 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 WDR75Q8IWA0 830 aaKnown RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 SDR42E1Q8WUS8 393 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 SLITRK6Q9H5Y7 841 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 CPSF1Q10570 1443 aaKnown RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 PYROXD1Q8WU10 500 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 UIMC1Q96RL1 719 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 CYTH2Q99418 400 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 PICK1Q9NRD5 415 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 DISC1Q9NRI5 854 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 PCDHB6Q9Y5E3 794 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 EIF3HO15372 352 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 GNPTABQ3T906 1256 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 APLFQ8IW19 511 aaPredicted RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 ZCCHC17Q9NP64 241 aaKnown RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 NDE1Q9NXR1 346 aa18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
COL4A3BP-203ENST00000380494 ERVV-2B6SEH9 535 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ACSL3O95573 720 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 RAD23BP54727 409 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 KLHL38Q2WGJ6 581 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 FBXO11Q86XK2 927 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 MCF2L2Q86YR7 1114 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 PROM2Q8N271 834 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 TLR7Q9NYK1 1049 aaKnown RBP18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ANO5Q75V66 913 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 TLK1Q9UKI8 766 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 GSTA4O15217 222 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 C1orf146Q5VVC0 180 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 A0A0G2JND7 137 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 RASA4BC9J798 803 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 RASA4O43374 803 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 MAN1A2O60476 641 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 KRT37O76014 449 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ADD2P35612 726 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ALCAMQ13740 583 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 PDIK1LQ8N165 341 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 H0Y3Z8 333 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 NBPF20Q3BBV1 942 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
COL4A3BP-203ENST00000380494 PTPREP23469 700 aa18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 PCYT1AP49585 367 aa18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 HOOK2Q96ED9 719 aa18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 CEP19Q96LK0 163 aa18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 KCNF1Q9H3M0 494 aa18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 GEMIN8Q9NWZ8 242 aaKnown RBP18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 APOBEC2Q9Y235 224 aaKnown RBP18.39■□□□□ 0.54
COL4A3BP-203ENST00000380494 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 CCDC127Q96BQ5 260 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 ATP7AQ04656 1500 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 FAM170AA1A519 330 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 TMEM191BP0C7N4 346 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 SAT1P21673 171 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 MDH1P40925 334 aaKnown RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 LRRC41Q15345 812 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 LRRC24Q50LG9 513 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 TAB3Q8N5C8 712 aaPredicted RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 BASP1P80723 227 aaKnown RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 DARS2Q6PI48 645 aaKnown RBP18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
COL4A3BP-203ENST00000380494 PPP1R37O75864 691 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms