RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
USP3-202ENST00000380324 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 GIT2Q14161 759 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 CYP26C1Q6V0L0 522 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 APOBEC3FQ8IUX4 373 aaKnown RBP13.31□□□□□ -0.28
USP3-202ENST00000380324 TEX2Q8IWB9 1127 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 SCYL3Q8IZE3 742 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 ZNF710Q8N1W2 664 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 SCFD1Q8WVM8 642 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 WDR24Q96S15 920 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 POLR3CQ9BUI4 534 aaPredicted RBP13.31□□□□□ -0.28
USP3-202ENST00000380324 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
USP3-202ENST00000380324 PHIPQ8WWQ0 1821 aa13.31□□□□□ -0.28
USP3-202ENST00000380324 FRMD3A2A2Y4 597 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
USP3-202ENST00000380324 ZBTB39O15060 712 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 TBCAO75347 108 aaKnown RBP13.3□□□□□ -0.28
USP3-202ENST00000380324 FGFR1OPO95684 399 aaKnown RBP13.3□□□□□ -0.28
USP3-202ENST00000380324 ITGB5P18084 799 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 FECHP22830 423 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 PRKG1Q13976 671 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 CHP1Q99653 195 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
USP3-202ENST00000380324 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 UNC45AQ9H3U1 944 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 STK24Q9Y6E0 443 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 HMGCS2P54868 508 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 MAN2A1Q16706 1144 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 CCDC40Q4G0X9 1142 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 OR8K1Q8NGG5 319 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 TTYH3Q9C0H2 523 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 FAM207AQ9NSI2 230 aaPredicted RBP13.3□□□□□ -0.28
USP3-202ENST00000380324 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
USP3-202ENST00000380324 SLITRK3O94933 977 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 EYA4O95677 639 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 PTPRAP18433 802 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 EIF2AK2P19525 551 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 EPS15P42566 896 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 USP14P54578 494 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 BACE1P56817 501 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 ZNF280CQ8ND82 737 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 BANK1Q8NDB2 785 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 WDR11Q9BZH6 1224 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 WRAP73Q9P2S5 460 aaPredicted RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 SBF1O95248 1867 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 SFI1A8K8P3 1242 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 TUBB4AP04350 444 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 MYBP10242 640 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
USP3-202ENST00000380324 ERGIC2Q96RQ1 377 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 ARID3AQ99856 593 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 KCNH7Q9NS40 1196 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 COL4A3BPQ9Y5P4 624 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 RLFQ13129 1914 aa13.29□□□□□ -0.28
USP3-202ENST00000380324 LOXHD1Q8IVV2 1947 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 URI1O94763 535 aaPredicted RBP13.28□□□□□ -0.28
USP3-202ENST00000380324 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
USP3-202ENST00000380324 ARHGAP29Q52LW3 1261 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
USP3-202ENST00000380324 LXNQ9BS40 222 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 VWA5AO00534 786 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 EPHB6O15197 1021 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 ZBED4O75132 1171 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 PRPF6O94906 941 aaKnown RBP13.28□□□□□ -0.28
USP3-202ENST00000380324 KIF20AO95235 890 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 SLU7O95391 586 aaKnown RBP13.28□□□□□ -0.28
USP3-202ENST00000380324 GCNT3O95395 438 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 WDR59Q6PJI9 974 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms