RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 VEZTQ9HBM0 779 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 HERC5Q9UII4 1024 aaKnown RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 KIF13BQ9NQT8 1826 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 A0A1W2PQJ5 194 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 EML1O00423 815 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 TRAF5O00463 557 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ENC1O14682 589 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 UBXN2AP68543 259 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 KCNMA1Q12791 1236 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 FIGNQ5HY92 759 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 CCDC174Q6PII3 467 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 POTEAQ6S8J7 498 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 KRT26Q7Z3Y9 468 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 SRGAP1Q7Z6B7 1085 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 SMCR8Q8TEV9 937 aaPredicted RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 FAM151AQ8WW52 585 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 NAPGQ99747 312 aaPredicted RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 TMOD2Q9NZR1 351 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ZBTB21Q9ULJ3 1066 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 TMX2Q9Y320 296 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 FHOD1Q9Y613 1164 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 CFBP00751 764 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 DPEP1P16444 411 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 CCDC122Q5T0U0 273 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 TSG101Q99816 390 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 PARD6BQ9BYG5 372 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 KCTD10Q9H3F6 313 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 RGL1Q9NZL6 768 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 HDAC6Q9UBN7 1215 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 VAV3Q9UKW4 847 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 IGLV3-22A0A075B6J6 115 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 SHTN1A0MZ66 631 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
PDLIM5-204ENST00000380176 FOSP01100 380 aaPredicted RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 RPA1P27694 616 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 CHMP4BP1P59074 171 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 FKBP3Q00688 224 aaKnown RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 AMPD2Q01433 879 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 APBA1Q02410 837 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 GIT2Q14161 759 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 CCDC65Q8IXS2 484 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 GPR161Q8N6U8 529 aaKnown RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 WDR18Q9BV38 432 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ST7Q9NRC1 585 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 EMILIN3Q9NT22 766 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 FBXO28Q9NVF7 368 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 ZNHIT6Q9NWK9 470 aaKnown RBP8.82□□□□□ -1
PDLIM5-204ENST00000380176 PLAGL2Q9UPG8 496 aa8.82□□□□□ -1
PDLIM5-204ENST00000380176 FRMD3A2A2Y4 597 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 RSPH10B2B2RC85 870 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 TBX3O15119 743 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 KRT18P05783 430 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 RSPH10BP0C881 870 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 POLD1P28340 1107 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 CIITAP33076 1130 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 OGFOD1Q8N543 542 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 GOLGA1Q92805 767 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 REEP2Q9BRK0 252 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 TANGO6Q9C0B7 1094 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 HAUS4Q9H6D7 363 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 PRDM16Q9HAZ2 1276 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 COL4A3BPQ9Y5P4 624 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 ABCB11O95342 1321 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 LRRC53A6NM62 1247 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 EIF3CLB5ME19 914 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 PIK3CDO00329 1044 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 ZBTB39O15060 712 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 FGFR1OPO95684 399 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 ATP1A1P05023 1023 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 PNMA6AP0CW24 399 aaPredicted RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 HOXD13P35453 343 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 CYLC1P35663 651 aaPredicted RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 ZNF76P36508 570 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 HAUS3Q68CZ6 603 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 RRAGAQ7L523 313 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 KIAA1328Q86T90 577 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 RTKN2Q8IZC4 609 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 SYT2Q8N9I0 419 aaPredicted RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 BAP1Q92560 729 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 RABGGTAQ92696 567 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 FAM20AQ96MK3 541 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 EIF3CQ99613 913 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 REPIN1Q9BWE0 567 aaKnown RBP8.81□□□□□ -1
PDLIM5-204ENST00000380176 DNM3Q9UQ16 869 aa8.81□□□□□ -1
PDLIM5-204ENST00000380176 CYP3A4P08684 503 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 HNRNPH3P31942 346 aaKnown RBP8.8□□□□□ -1
PDLIM5-204ENST00000380176 KRT83P78385 493 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 CCDC40Q4G0X9 1142 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 DEFB132Q7Z7B7 95 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 SFR1Q86XK3 245 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 CCDC170Q8IYT3 715 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms