RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 NHEJ1Q9H9Q4 299 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 FGFR1OP2Q9NVK5 253 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 H0YGN5 161 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 IDO1P14902 403 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 GM2AP17900 193 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SMARCA1P28370 1054 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 HALP42357 657 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 CLPPQ16740 277 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 USH1GQ495M9 461 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 FITM2Q8N6M3 262 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 RSPH1Q8WYR4 309 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 NCSTNQ92542 709 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 EDC3Q96F86 508 aaKnown RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 HAPLN3Q96S86 360 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 TSPYL4Q9UJ04 414 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 NFS1Q9Y697 457 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 A0A1W2PP64 1363 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 OPHN1O60890 802 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PDE5AO76074 875 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CCR3P51677 355 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CDKAL1Q5VV42 579 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 LRRC8BQ6P9F7 803 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PEX5LQ8IYB4 626 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 FAM13CQ8NE31 585 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CXorf38Q8TB03 319 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 SNX27Q96L92 541 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CCDC42Q96M95 316 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TMEM237Q96Q45 408 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 NDEL1Q9GZM8 345 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 SEC31BQ9NQW1 1179 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 DDX18Q9NVP1 670 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TLR7Q9NYK1 1049 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF148Q9UQR1 794 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 ZC3H13Q5T200 1668 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 RAD51CO43502 376 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PPP6R2O75170 966 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 ASMTLO95671 621 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PLCG2P16885 1265 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TRPC1P48995 793 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TBL3Q12788 808 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CYLC2Q14093 348 aaPredicted RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 ASRGL1Q7L266 308 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 NAT14Q8WUY8 206 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CASP10Q92851 521 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 UTP4Q969X6 686 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 DUSP9Q99956 384 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 IFIH1Q9BYX4 1025 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CTNNAL1Q9UBT7 734 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 OVOS2A0A0G2JMS6 1433 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 OVOS2A0A0J9YW53 1432 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 OVOS2Q6IE36 1432 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PCDH11XQ9BZA7 1347 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 STK10O94804 968 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 LYNP07948 512 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TUFMP49411 452 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 USP11P51784 963 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PMS2P54278 862 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 PDE1BQ01064 536 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TTLL12Q14166 644 aaPredicted RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 LRRC14Q15048 493 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 WDR59Q6PJI9 974 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 STOX1Q6ZVD7 989 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 HS2ST1Q7LGA3 356 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF572Q7Z3I7 529 aaPredicted RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 TTC30AQ86WT1 665 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 DQX1Q8TE96 717 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 UBAC1Q9BSL1 405 aa9.23□□□□□ -0.93
NHLRC3-201ENST00000379599 JCADQ9P266 1359 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 BUB1O43683 1085 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 COG7P83436 770 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 INAQ16352 499 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 DTX3LQ8TDB6 740 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 EIF2AQ9BY44 585 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 LRRC4CQ9HCJ2 640 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 PA2G4Q9UQ80 394 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 CHD2O14647 1828 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 GOLGA8AA7E2F4 631 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TCP11X1B4DZS4 312 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 KCNJ18B7U540 433 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 PRLRP16471 622 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TMED10P49755 219 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms