RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 SALL3Q9BXA9 1300 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 GH2P01242 217 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 STIP1P31948 543 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 ADCY7P51828 1080 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 AMPD3Q01432 767 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 FAM228AQ86W67 206 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 MUC3AQ02505 3323 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 B4DLN1 442 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 CEP104O60308 925 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 SNAP25P60880 206 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 SFSWAPQ12872 951 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 CBX3Q13185 183 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCDHGA1-201ENST00000378105 GSG1L2A8MUP6 293 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 PDE6CP51160 858 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 USP11P51784 963 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 GNGT1P63211 74 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 MIPOL1Q8TD10 442 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 OSBPL9Q96SU4 736 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 L2HGDHQ9H9P8 463 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 HOMER3Q9NSC5 361 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 AHCYL1O43865 530 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 SH3BP5O60239 455 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 LINGO3P0C6S8 592 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 UBXN2AP68543 259 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 USP28Q96RU2 1077 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 NEDD4P46934 1319 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 SFI1A8K8P3 1242 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 FNTAP49354 379 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 STX1AQ16623 288 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 TLDC1Q6P9B6 456 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 TRIM47Q96LD4 638 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 SLC39A3Q9BRY0 314 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 PCMTD2Q9NV79 361 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 MTMR6Q9Y217 621 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
PCDHGA1-201ENST00000378105 NEMFO60524 1076 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 ZBED4O75132 1171 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 CLEC10AQ8IUN9 316 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 TEKT4Q8WW24 435 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 C2CD2Q9Y426 696 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 ZMYM6O95789 1325 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 FESP07332 822 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 TYRO3Q06418 890 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 C6orf183Q5T699 404 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 CCDC13Q8IYE1 715 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 NR1H4Q96RI1 486 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 ELP1O95163 1332 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 PDHA1P08559 390 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 SLC8A3P57103 927 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
PCDHGA1-201ENST00000378105 TTLL1O95922 423 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 BPIFB4P59827 614 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 CYB5D1Q6P9G0 228 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 CYB5R4Q7L1T6 521 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 PNMA8AQ86V59 439 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 COA7Q96BR5 231 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 TSG101Q99816 390 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 GINS2Q9Y248 185 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 ZNF711Q9Y462 761 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 A0A1W2PQ67 120 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 AKR1B10O60218 316 aa11.81□□□□□ -0.52
PCDHGA1-201ENST00000378105 IRAK1P51617 712 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms