RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 TRIM7Q9C029 511 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 DDX47Q9H0S4 455 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 SPATA31A3Q5VYP0 1347 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 ZSCAN5CA6NGD5 496 aaPredicted RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 ZNF263O14978 683 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 GBP1P32455 592 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 EXOC3L4Q17RC7 722 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 MEI1Q5TIA1 1274 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 ALKBH5Q6P6C2 394 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 SART1O43290 800 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 TMOD1P28289 359 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 PREPLQ4J6C6 727 aaPredicted RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 ZNF34Q8IZ26 560 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 NEK9Q8TD19 979 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 HOMER3Q9NSC5 361 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 DDX20Q9UHI6 824 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 DAAM1Q9Y4D1 1078 aa10.92□□□□□ -0.66
RNF38-206ENST00000377885 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
RNF38-206ENST00000377885 PHRF1Q9P1Y6 1649 aaKnown RBP10.91□□□□□ -0.66
RNF38-206ENST00000377885 LCA5LO95447 670 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 MMEP08473 750 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 KCNV1Q6PIU1 500 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ADGRA1Q86SQ6 560 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 GPBP1Q86WP2 473 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ANKS1AQ92625 1134 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 KAT6BQ8WYB5 2073 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 MYMKA6NI61 221 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 SLMAPQ14BN4 828 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ZRSR2Q15696 482 aaKnown RBP10.91□□□□□ -0.66
RNF38-206ENST00000377885 C4orf32Q8N8J7 132 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 PLCD4Q9BRC7 762 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 JAG2Q9Y219 1238 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 STXBP3O00186 592 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 USP17L8P0C7I0 530 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
RNF38-206ENST00000377885 SF3A3Q12874 501 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNF38-206ENST00000377885 CALCOCO2Q13137 446 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 UBL4BQ8N7F7 174 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 TFCP2L1Q9NZI6 479 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 MTUS1Q9ULD2 1270 aa10.91□□□□□ -0.66
RNF38-206ENST00000377885 CFAP73A6NFT4 308 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 hCG_1984214I3L0E3 225 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 DAPK3O43293 454 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 TRIM37O94972 964 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 AFPP02771 609 aaKnown RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 SBK1Q52WX2 424 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 ANKRD20A8PQ5CZ79 823 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 SEL1L2Q5TEA6 688 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 TEX11Q8IYF3 940 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 ZNF713Q8N859 430 aaPredicted RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 KIAA0895Q8NCT3 520 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 STAT1P42224 750 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 SCTRP47872 440 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 USP11P51784 963 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 COASYQ13057 564 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 NPY5RQ15761 445 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 SIPA1L3O60292 1781 aaPredicted RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 PHF20L1A8MW92 1017 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 CES2O00748 559 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 TNFAIP3P21580 790 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 NR2F2P24468 414 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 GCKP35557 465 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 RAPGEF5Q92565 580 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 XPO6Q96QU8 1125 aaKnown RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 EYA3Q99504 573 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 METTL14Q9HCE5 456 aaKnown RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 KCNK9Q9NPC2 374 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 HDAC9Q9UKV0 1011 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 DIS3Q9Y2L1 958 aaKnown RBP10.9□□□□□ -0.66
RNF38-206ENST00000377885 TRAPPC3O43617 180 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 FERP16591 822 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 DR1Q01658 176 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 PPP2R5AQ15172 486 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 CCDC25Q86WR0 208 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 PCDHA12Q9UN75 941 aa10.9□□□□□ -0.66
RNF38-206ENST00000377885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNF38-206ENST00000377885 CETN1Q12798 172 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 CRYMQ14894 314 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 FAM133BQ5BKY9 247 aaKnown RBP10.89□□□□□ -0.67
RNF38-206ENST00000377885 C6orf118Q5T5N4 469 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 STXBP4Q6ZWJ1 553 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 PLVAPQ9BX97 442 aa10.89□□□□□ -0.67
RNF38-206ENST00000377885 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms