RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 COL18A1P39060 1754 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 DCCP43146 1447 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 TTI1O43156 1089 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CDC25CP30307 473 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CASP4P49662 377 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CAPN12Q6ZSI9 719 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 LRRC4CQ9HCJ2 640 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PLAGL2Q9UPG8 496 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 GDF11O95390 407 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 LSP1P33241 339 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PTK2Q05397 1052 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PDXDC1Q6P996 788 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 CCDC84Q86UT8 332 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TAB3Q8N5C8 712 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TACO1Q9BSH4 297 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 RGL1Q9NZL6 768 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PCDHAC2Q9Y5I4 1007 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 HNRNPH1P31943 449 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PLTPP55058 493 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 KCNH2Q12809 1159 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 LRRC14Q15048 493 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TRIP13Q15645 432 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 GLG1Q92896 1179 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 CABS1Q96KC9 395 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 FAM118BQ9BPY3 351 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 GCOM1H8Y6P7 765 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 TLR2O60603 784 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 MYZAPP0CAP1 466 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 KCNMA1Q12791 1236 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 MTM1Q13496 603 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 FAM182AQ5T1J6 154 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 CCDC121Q6ZUS5 278 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 OSGEPQ9NPF4 335 aa12.93□□□□□ -0.34
MCF2L-202ENST00000375597 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 ORC4O43929 436 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 CTNNBL1Q8WYA6 563 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 TJP1Q07157 1748 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 NUP188Q5SRE5 1749 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 PLA2G4BP0C869 781 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 SFR1Q86XK3 245 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 GLYCTKQ8IVS8 523 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 DYDC1Q8WWB3 177 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 LUC7LQ9NQ29 371 aaKnown RBP12.92□□□□□ -0.34
MCF2L-202ENST00000375597 SNX24Q9Y343 169 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 FLT1P17948 1338 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 ATRNO75882 1429 aa12.92□□□□□ -0.34
MCF2L-202ENST00000375597 FGGP02679 453 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 MYBP10242 640 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 SP4Q02446 784 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 KCNB1Q14721 858 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 CCT8L2Q96SF2 557 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 TTYH3Q9C0H2 523 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 BHMT2Q9H2M3 363 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 GOLGA8KD6RF30 607 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 OPLAHO14841 1288 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 CETN3O15182 167 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 CALCAP01258 141 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 TNNC1P63316 161 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 MEA1Q16626 185 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 UNC13DQ70J99 1090 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 ANKRD42Q8N9B4 389 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms