RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 SFI1A8K8P3 1242 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 THEGLP0DJG4 465 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 STARP49675 285 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 KPNA2P52292 529 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GIT2Q14161 759 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CLMNQ96JQ2 1002 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PPP1R13BQ96KQ4 1090 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TMEM168Q9H0V1 697 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TRPV6Q9H1D0 765 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GPN3Q9UHW5 284 aaPredicted RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PLOD2O00469 737 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PSMA7O14818 248 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GOLGA8HP0CJ92 632 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 MAPRE1Q15691 268 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PKN1Q16512 942 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 KLHL17Q6TDP4 642 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 XXYLT1Q8NBI6 393 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TDRD7Q8NHU6 1098 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 WDR36Q8NI36 951 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CLP1Q92989 425 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 HAVCR1Q96D42 359 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 ARHGEF33A8MVX0 844 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TRIM24O15164 1050 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TCP1P17987 556 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 HMOX2P30519 316 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GNGT1P63211 74 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 WASHC2DQ5SRD0 308 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 MREGQ8N565 214 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 C8orf76Q96K31 380 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TRMT6Q9UJA5 497 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 ANAPC5Q9UJX4 755 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 SH3GLB1Q9Y371 365 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 KIAA0100Q14667 2235 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 A0A1W2PQ72 361 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 ENO4A6NNW6 628 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 AIPO00170 330 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 UBE2HP62256 183 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 C2CD6Q53TS8 623 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 LIN9Q5TKA1 542 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 NCLNQ969V3 563 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 NPHS2Q9NP85 383 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CTNNAL1Q9UBT7 734 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 RSF1Q96T23 1441 aaPredicted RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 DOCK9Q9BZ29 2069 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CALB1P05937 261 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 FDPSP14324 419 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 RAB4AP20338 218 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PDE6BP35913 854 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 UBA7P41226 1012 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 MAGEA9P43362 315 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 BNC1Q01954 994 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 SAMD3Q8N6K7 520 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GANCQ8TET4 914 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TEKT3Q9BXF9 490 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 MBIPQ9NS73 344 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 TBC1D14Q9P2M4 693 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 EVC2Q86UK5 1308 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 C2orf71A6NGG8 1288 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CTNND1O60716 968 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 QARSP47897 775 aaKnown RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 ILF3Q12906 894 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 SPARCL1Q14515 664 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 EDRF1Q3B7T1 1238 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CENPTQ96BT3 561 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 DNAJC11Q9NVH1 559 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 SELENONQ9NZV5 590 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 CYTH4Q9UIA0 394 aa6.39□□□□□ -1.39
SCN2A-202ENST00000375427 NPIPA7E9PJI5 369 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 F8W8V4 182 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 UBTFL1P0CB47 393 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 NPIPA8P0DM63 369 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PPP1R2P41236 205 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 DHX34Q14147 1143 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 C2orf76Q3KRA6 126 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RELL1Q8IUW5 271 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CCDC24Q8N4L8 307 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PGBD1Q96JS3 809 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RANBP17Q9H2T7 1088 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RNF103-CHMP3A0A140T963 221 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 DFFAO00273 331 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ALDH1L1O75891 902 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SUPT7LO94864 414 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HMGB2P26583 209 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 YWHAQP27348 245 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RCVRNP35243 200 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 MRPL12P52815 198 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SPANXN2Q5MJ10 180 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 FCHSD1Q86WN1 690 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 EXOC6Q8TAG9 804 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 DHX38Q92620 1227 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CDKL2Q92772 493 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 VCPKMTQ9H867 229 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms