RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NBR1Q14596 966 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 ABHD15Q6UXT9 468 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 SMAP1Q8IYB5 467 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-202ENST00000374676 RDM1Q8NG50 284 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
HSPG2-202ENST00000374676 GJA10Q969M2 543 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 GLT1D1Q96MS3 346 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 UIMC1Q96RL1 719 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 MTG1Q9BT17 334 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-202ENST00000374676 SEZ6LQ9BYH1 1024 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 ZDHHC9Q9Y397 364 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 TELO2Q9Y4R8 837 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 PCDHA10Q9Y5I2 948 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 CEP290O15078 2479 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 IGKV6D-21A0A0A0MT36 114 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 WDR64B1ANS9 1081 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 DDX39AO00148 427 aaKnown RBP12.82□□□□□ -0.36
HSPG2-202ENST00000374676 LGR5O75473 907 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 BMP15O95972 392 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 LGALS2P05162 132 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 TCF7P36402 384 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-202ENST00000374676 PRPHP41219 470 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 JAK3P52333 1124 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 SP4Q02446 784 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 PTGDRQ13258 359 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 CXCL17Q6UXB2 119 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 KAT2BQ92831 832 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 C16orf70Q9BSU1 422 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-202ENST00000374676 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 DISC1Q9NRI5 854 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 VAV3Q9UKW4 847 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
HSPG2-202ENST00000374676 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 H3BRB1 525 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 HAS3O00219 553 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 F2P00734 622 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 PSAPP07602 524 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SUPT20HL2P0C7V6 817 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 TXKP42681 527 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 RGS19P49795 217 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 NUCB2P80303 420 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SNX17Q15036 470 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 ATL3Q6DD88 541 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 MIS18BP1Q6P0N0 1132 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 FAM173BQ6P4H8 233 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 PLPPR4Q7Z2D5 763 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 MIER3Q7Z3K6 550 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SLC43A3Q8NBI5 491 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 ZNF396Q96N95 335 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-202ENST00000374676 PCYT2Q99447 389 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 KATNAL1Q9BW62 490 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 SMARCAD1Q9H4L7 1026 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 TUT1Q9H6E5 874 aaKnown RBP12.81□□□□□ -0.36
HSPG2-202ENST00000374676 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-202ENST00000374676 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-202ENST00000374676 TCHHQ07283 1943 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 DNAH12Q6ZR08 3092 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 EMSYQ7Z589 1322 aa12.81□□□□□ -0.36
HSPG2-202ENST00000374676 TRIP12Q14669 1992 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 PSEN2P49810 448 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 SLC26A2P50443 739 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 CDK7P50613 346 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 STAT5BP51692 787 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 PDIA5Q14554 519 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 EPHA7Q15375 998 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 UTP14CQ5TAP6 766 aaKnown RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 FAM160B1Q5W0V3 765 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 AFAP1L1Q8TED9 768 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 ZNF215Q9UL58 517 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-202ENST00000374676 GRIN2DO15399 1336 aa12.8□□□□□ -0.36
HSPG2-202ENST00000374676 ARVCFO00192 962 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 EML1O00423 815 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 CHMP2AO43633 222 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-202ENST00000374676 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
HSPG2-202ENST00000374676 PTPN11Q06124 597 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-202ENST00000374676 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 MFSD10Q14728 455 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms