RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 BCAS3Q9H6U6 928 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 WDR64B1ANS9 1081 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 GGPS1O95749 300 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 EPHA7Q15375 998 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 DUSP28Q4G0W2 176 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 PRAMEF19Q5SWL8 479 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 CELF3Q5SZQ8 465 aaKnown RBP16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 FMR1NBQ8N0W7 255 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 GRPEL1Q9HAV7 217 aa16.44■□□□□ 0.22
SMPDL3B-201ENST00000373888 A0A087X0B3 334 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 ADCY3O60266 1144 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 NR1I2O75469 434 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 CYBAP13498 195 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 RPA1P27694 616 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 SYKP43405 635 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 HYIQ5T013 277 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 MIER3Q7Z3K6 550 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 EMID1Q96A84 441 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 PYM1Q9BRP8 204 aaKnown RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 KDM3AQ9Y4C1 1321 aa16.43■□□□□ 0.22
SMPDL3B-201ENST00000373888 ATG7O95352 703 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 HMGCRP04035 888 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 ELNP15502 786 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 SMPD1P17405 629 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 ACTR2P61160 394 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 PCDHA10Q9Y5I2 948 aa16.42■□□□□ 0.22
SMPDL3B-201ENST00000373888 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 POLR2DO15514 142 aaKnown RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 MED24O75448 989 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 ZNF202O95125 648 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 GH1P01241 217 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 SPATA31C1P0DKV0 1188 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 MUTP22033 750 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 TNFAIP2Q03169 654 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 CACNB2Q08289 660 aaPredicted RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 GRB10Q13322 594 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 LAMC2Q13753 1193 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 E2F4Q16254 413 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 TMEM119Q4V9L6 283 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 LRSAM1Q6UWE0 723 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 PDILTQ8N807 584 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 SLAIN1Q8ND83 568 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 COPS5Q92905 334 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 PNMA5Q96PV4 448 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 NT5C3AQ9H0P0 336 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 DDX19AQ9NUU7 478 aaKnown RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 FAM184BQ9ULE4 1060 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 GNEQ9Y223 722 aaKnown RBP16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 SAMM50Q9Y512 469 aa16.41■□□□□ 0.22
SMPDL3B-201ENST00000373888 FOXN1O15353 648 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 ADCY6O43306 1168 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SORBS3O60504 671 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SLITRK3O94933 977 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 P4HBP07237 508 aaKnown RBP16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 AKR1A1P14550 325 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 PLCG1P19174 1290 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 TRIM32Q13049 653 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 ECM1Q16610 540 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 IQUBQ8NA54 791 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 DYDC2Q96IM9 177 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 TIGD1Q96MW7 591 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 RGL1Q9NZL6 768 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 USP25Q9UHP3 1055 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 GSTTP1A0A1W2PQM5 241 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms