RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 AK8Q96MA6 479 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 TMEM165Q9HC07 324 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
NCDN-202ENST00000373243 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 CYP2J2P51589 502 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 DDR1Q08345 913 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 TTI2Q6NXR4 508 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 CUL5Q93034 780 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 ARL8AQ96BM9 186 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 MTA3Q9BTC8 594 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
NCDN-202ENST00000373243 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 MGARPQ8TDB4 240 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 TATDN2Q93075 761 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.29
NCDN-202ENST00000373243 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 RAB21Q9UL25 225 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.29
NCDN-202ENST00000373243 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
NCDN-202ENST00000373243 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.3
NCDN-202ENST00000373243 NTSR2O95665 410 aa13.21□□□□□ -0.3
NCDN-202ENST00000373243 PLCG2P16885 1265 aa13.21□□□□□ -0.3
NCDN-202ENST00000373243 SEC24CP53992 1094 aa13.21□□□□□ -0.3
NCDN-202ENST00000373243 UBXN2AP68543 259 aa13.21□□□□□ -0.3
NCDN-202ENST00000373243 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.3
NCDN-202ENST00000373243 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.3
NCDN-202ENST00000373243 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.3
NCDN-202ENST00000373243 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.3
NCDN-202ENST00000373243 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
NCDN-202ENST00000373243 UPP2O95045 317 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 DNM3Q9UQ16 869 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ORC4O43929 436 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
NCDN-202ENST00000373243 NEFHP12036 1026 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 PECAM1P16284 738 aaPredicted RBP13.2□□□□□ -0.3
NCDN-202ENST00000373243 NR1D1P20393 614 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 STAT3P40763 770 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 IFNAR2P48551 515 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 GRIK3Q13003 919 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 POTECB2RU33 542 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 LAD1O00515 517 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ACTN1P12814 892 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 HS2ST1Q7LGA3 356 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 ARHGAP20Q9P2F6 1191 aa13.2□□□□□ -0.3
NCDN-202ENST00000373243 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
NCDN-202ENST00000373243 LRRN2O75325 713 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 FLOT1O75955 427 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 GFPT2O94808 682 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 CACNB3P54284 484 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 GRM4Q14833 912 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 LRRC45Q96CN5 670 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 MRRFQ96E11 262 aaKnown RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 KCNK9Q9NPC2 374 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 PLAAQ9Y263 795 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 PDCD2Q16342 344 aaPredicted RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 TTBK2Q6IQ55 1244 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 CYB5D1Q6P9G0 228 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms