RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 KCTD1Q719H9 257 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 KANSL2Q9H9L4 492 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 PITPNM2Q9BZ72 1349 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 GLI1P08151 1106 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 IRAK1P51617 712 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP11P51784 963 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 CRYGNQ8WXF5 182 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 GRID2IPA4D2P6 1211 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 BTNL10A8MVZ5 291 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 MED24O75448 989 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 SSBP05455 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 SPIRE1Q08AE8 756 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 TTMPQ5BVD1 217 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 LUC7LQ9NQ29 371 aaKnown RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L15C9J2P7 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L13C9JLJ4 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L11C9JVI0 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L18D6R9N7 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L22D6RA61 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L17D6RBQ6 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L19D6RCP7 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L20D6RJB6 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 MARCH6O60337 910 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 CLSTN1O94985 981 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L24Q0WX57 530 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 ADAM9Q13443 819 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L6PQ6QN14 398 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 ZFP91Q96JP5 570 aaPredicted RBP14.03□□□□□ -0.16
CTPS1-202ENST00000372621 PACSIN1Q9BY11 444 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 GRIN2DO15399 1336 aa14.03□□□□□ -0.16
CTPS1-202ENST00000372621 C6orf229H3BNL8 230 aa14.02□□□□□ -0.16
CTPS1-202ENST00000372621 OPA1O60313 960 aa14.02□□□□□ -0.16
CTPS1-202ENST00000372621 NAP1L1P55209 391 aaKnown RBP14.02□□□□□ -0.16
CTPS1-202ENST00000372621 GBP6Q6ZN66 633 aa14.02□□□□□ -0.16
CTPS1-202ENST00000372621 FTCDO95954 541 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 CORO7P57737 925 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 KCNH2Q12809 1159 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 RAPGEF1Q13905 1077 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 MOXD1Q6UVY6 613 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 IRF2BP2Q7Z5L9 587 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 IFT20Q8IY31 132 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 COA1Q9GZY4 146 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 GLT8D2Q9H1C3 349 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 ADAMTS1Q9UHI8 967 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 TRAF3IP3Q9Y228 551 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 HOXD13P35453 343 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 CARSP49589 748 aaKnown RBP14.02□□□□□ -0.17
CTPS1-202ENST00000372621 CASP5P51878 434 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 KLHL30Q0D2K2 578 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 QRICH1Q2TAL8 776 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 IQCKQ8N0W5 287 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 ETNPPLQ8TBG4 499 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 ARL8AQ96BM9 186 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.17
CTPS1-202ENST00000372621 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 TMEM59LQ9UK28 342 aa14.02□□□□□ -0.17
CTPS1-202ENST00000372621 STAT3P40763 770 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 SF3B2Q13435 895 aaKnown RBP14.01□□□□□ -0.17
CTPS1-202ENST00000372621 EPM2AIP1Q7L775 607 aaPredicted RBP14.01□□□□□ -0.17
CTPS1-202ENST00000372621 MREGQ8N565 214 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 ZIM3Q96PE6 472 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
CTPS1-202ENST00000372621 CAPS2Q9BXY5 557 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 ANO3Q9BYT9 981 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 PLCB1Q9NQ66 1216 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 ZSCAN5CA6NGD5 496 aaPredicted RBP14.01□□□□□ -0.17
CTPS1-202ENST00000372621 F8W031 263 aaPredicted RBP14.01□□□□□ -0.17
CTPS1-202ENST00000372621 CES2O00748 559 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 MEIS2O14770 477 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 MAGEA9P43362 315 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 SKOR1P84550 965 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 GIT2Q14161 759 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 ASIC2Q16515 512 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 CDC42EP5Q6NZY7 148 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 CATSPER3Q86XQ3 398 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 SLFN12Q8IYM2 578 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 DNAJC18Q9H819 358 aa14.01□□□□□ -0.17
CTPS1-202ENST00000372621 POTEFA5A3E0 1075 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 CETN3O15182 167 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 HSF2BPO75031 334 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 HEXIM1O94992 359 aaKnown RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 FAM153BP0C7A2 387 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms