RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ATG7O95352 703 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 MBD3O95983 291 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 AKR1A1P14550 325 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 PFKFB1P16118 471 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 SMPD1P17405 629 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 MUTP22033 750 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 CDC25AP30304 524 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 CACNB2Q08289 660 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-204ENST00000372243 LAMC2Q13753 1193 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 HYIQ5T013 277 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 CABP7Q86V35 215 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 PYM1Q9BRP8 204 aaKnown RBP17.8■□□□□ 0.44
TMEM53-204ENST00000372243 POLR3CQ9BUI4 534 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-204ENST00000372243 DISC1Q9NRI5 854 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 CCDC39Q9UFE4 941 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
TMEM53-204ENST00000372243 Q9Y3F1 56 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 PTCH2Q9Y6C5 1203 aa17.8■□□□□ 0.44
TMEM53-204ENST00000372243 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.79■□□□□ 0.44
TMEM53-204ENST00000372243 CHMP2AO43633 222 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 RPA1P27694 616 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 GRK4P32298 578 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 ACTR2P61160 394 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 ARHGAP1Q07960 439 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 TRPV1Q8NER1 839 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 ENGASEQ8NFI3 743 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 CALML4Q96GE6 196 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 HSD17B14Q9BPX1 270 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 EIF2AK1Q9BQI3 630 aaKnown RBP17.79■□□□□ 0.44
TMEM53-204ENST00000372243 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 KCNH3Q9ULD8 1083 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 SEPT4O43236 478 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 PRKAR2AP13861 404 aaKnown RBP17.79■□□□□ 0.44
TMEM53-204ENST00000372243 NDUFA8P51970 172 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 TMEM63BQ5T3F8 832 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 ABHD15Q6UXT9 468 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 COPS5Q92905 334 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 NT5C3AQ9H0P0 336 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 SAMM50Q9Y512 469 aa17.79■□□□□ 0.44
TMEM53-204ENST00000372243 ADCY6O43306 1168 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 P4HBP07237 508 aaKnown RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 PSAPP07602 524 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 CCT6AP40227 531 aaKnown RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 LBX1P52954 281 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 TRIM32Q13049 653 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 HSDL1Q3SXM5 330 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 CATSPER3Q86XQ3 398 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 FMR1NBQ8N0W7 255 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-204ENST00000372243 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 SEPT1Q8WYJ6 367 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 SPATA33Q96N06 139 aa17.78■□□□□ 0.44
TMEM53-204ENST00000372243 IGKV6D-21A0A0A0MT36 114 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.44
TMEM53-204ENST00000372243 SLITRK3O94933 977 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 SUPT20HL2P0C7V6 817 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 SPATA31C1P0DKV0 1188 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 LIG1P18858 919 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 SYKP43405 635 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 KARSQ15046 597 aaKnown RBP17.77■□□□□ 0.44
TMEM53-204ENST00000372243 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 PPTC7Q8NI37 304 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 GPR20Q99678 358 aa17.77■□□□□ 0.44
TMEM53-204ENST00000372243 A0A087X0B3 334 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 GSTTP1A0A1W2PQM5 241 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
TMEM53-204ENST00000372243 DKC1O60832 514 aaKnown RBP eCLIP17.76■□□□□ 0.43
TMEM53-204ENST00000372243 MED24O75448 989 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 INHAP05111 366 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 GRB10Q13322 594 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 PKN2Q16513 984 aaKnown RBP17.76■□□□□ 0.43
TMEM53-204ENST00000372243 KLHL40Q2TBA0 621 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 GJC2Q5T442 439 aaPredicted RBP17.76■□□□□ 0.43
TMEM53-204ENST00000372243 IQUBQ8NA54 791 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 DYDC2Q96IM9 177 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 CDK5RAP3Q96JB5 506 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 PNMA5Q96PV4 448 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 USP25Q9UHP3 1055 aa17.76■□□□□ 0.43
TMEM53-204ENST00000372243 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
TMEM53-204ENST00000372243 SORBS3O60504 671 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 NR1I2O75469 434 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 ZNF202O95125 648 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 LYPLA2O95372 231 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 HOXD8P13378 290 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-204ENST00000372243 TCF7P36402 384 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-204ENST00000372243 QARSP47897 775 aaKnown RBP17.75■□□□□ 0.43
TMEM53-204ENST00000372243 NKX3-2P78367 333 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 SP4Q02446 784 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 E2F4Q16254 413 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 TMEM119Q4V9L6 283 aa17.75■□□□□ 0.43
TMEM53-204ENST00000372243 WDR81Q562E7 1941 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms