RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 KIF11P52732 1056 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 DLGAP5Q15398 846 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 PPP4R3CPQ6ZMV5 832 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 TRIM59Q8IWR1 403 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 SYT2Q8N9I0 419 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-204ENST00000372064 NEK11Q8NG66 645 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 TANGO6Q9C0B7 1094 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 ARHGEF10LQ9HCE6 1279 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 DUSP10Q9Y6W6 482 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 FAM193AP78312 1265 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 CCDC40Q4G0X9 1142 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 RRAGAQ7L523 313 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 CAMKK2Q96RR4 588 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 VAV3Q9UKW4 847 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 PCDHA13Q9Y5I0 950 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 ATAD5Q96QE3 1844 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 TUBBP07437 444 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 EIF4A3P38919 411 aaKnown RBP22.75■■□□□ 1.23
VEGFA-204ENST00000372064 PABPC4Q13310 644 aaKnown RBP eCLIP22.75■■□□□ 1.235e-10■■■■■ 60.6
VEGFA-204ENST00000372064 EDRF1Q3B7T1 1238 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 FAM83BQ5T0W9 1011 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 KRT26Q7Z3Y9 468 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 CDAN1Q8IWY9 1227 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 NOA1Q8NC60 698 aaKnown RBP22.75■■□□□ 1.23
VEGFA-204ENST00000372064 FAM151AQ8WW52 585 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 GMLQ99445 158 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 ZNF277Q9NRM2 450 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-204ENST00000372064 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-204ENST00000372064 TMX2Q9Y320 296 aa22.75■■□□□ 1.23
VEGFA-204ENST00000372064 GIT2Q14161 759 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 ASTE1Q2TB18 679 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 BEND6Q5SZJ8 279 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 GPIHBP1Q8IV16 184 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 SMCR8Q8TEV9 937 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 SECISBP2LQ93073 1101 aaKnown RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 MAP2K7O14733 419 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 MAPK8IP2Q13387 824 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 TTLL6Q8N841 843 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 TBC1D5Q92609 795 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 IFIH1Q9BYX4 1025 aaKnown RBP22.74■■□□□ 1.23
VEGFA-204ENST00000372064 CEP72Q9P209 647 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 ZBTB21Q9ULJ3 1066 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 DNM3Q9UQ16 869 aa22.74■■□□□ 1.23
VEGFA-204ENST00000372064 VIL1P09327 827 aaKnown RBP22.73■■□□□ 1.23
VEGFA-204ENST00000372064 ZNF76P36508 570 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 SH2D4AQ9H788 454 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 CNTNAP1P78357 1384 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 NOL4O94818 638 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 CYP4A11Q02928 519 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 SYN2Q92777 582 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-204ENST00000372064 VEZTQ9HBM0 779 aa22.73■■□□□ 1.23
VEGFA-204ENST00000372064 SSU72P8A0A1W2PR75 194 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 USO1O60763 962 aaKnown RBP22.72■■□□□ 1.23
VEGFA-204ENST00000372064 RHOXF2BP0C7M4 288 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 HGSNATQ68CP4 663 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 OGFOD1Q8N543 542 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 RHOXF2Q9BQY4 288 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 NUCKS1Q9H1E3 243 aaKnown RBP22.72■■□□□ 1.23
VEGFA-204ENST00000372064 HDAC9Q9UKV0 1011 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 FAM184BQ9ULE4 1060 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 CFBP00751 764 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 CASP5P51878 434 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 CCDC174Q6PII3 467 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 EPM2AIP1Q7L775 607 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-204ENST00000372064 KCTD17Q8N5Z5 321 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 RPGRIP1Q96KN7 1286 aa22.72■■□□□ 1.23
VEGFA-204ENST00000372064 POLR3CQ9BUI4 534 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-204ENST00000372064 MACROD2A1Z1Q3 448 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 ERLIN1O75477 346 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 WDR93Q6P2C0 686 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 SLC30A10Q6XR72 485 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 TRIM58Q8NG06 486 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 MMS19Q96T76 1030 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 COL4A5P29400 1685 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 IGLV3-22A0A075B6J6 115 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 TRAF1Q13077 416 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 ZYXQ15942 572 aaKnown RBP22.71■■□□□ 1.23
VEGFA-204ENST00000372064 SPDYE2Q495Y8 402 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 CACNA2D4Q7Z3S7 1137 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 REEP2Q9BRK0 252 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 DEF6Q9H4E7 631 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 GOPCQ9HD26 462 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 TRAF3IP3Q9Y228 551 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.71■■□□□ 1.231e-11■□□□□ 9.4
VEGFA-204ENST00000372064 EML1O00423 815 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 PJA2O43164 708 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 SRGAP2O75044 1071 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 VSNL1P62760 191 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 CKAP4Q07065 602 aaKnown RBP22.71■■□□□ 1.23
VEGFA-204ENST00000372064 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 MSL3Q8N5Y2 521 aaKnown RBP22.71■■□□□ 1.23
VEGFA-204ENST00000372064 TMEM39BQ9GZU3 492 aa22.71■■□□□ 1.23
VEGFA-204ENST00000372064 RBAK-RBAKDNI3L0D1 243 aa22.7■■□□□ 1.22
VEGFA-204ENST00000372064 ADAM9Q13443 819 aa22.7■■□□□ 1.22
VEGFA-204ENST00000372064 PSMD1Q99460 953 aa22.7■■□□□ 1.22
VEGFA-204ENST00000372064 AKR1B10O60218 316 aa22.7■■□□□ 1.22
VEGFA-204ENST00000372064 SMC1AQ14683 1233 aaKnown RBP22.7■■□□□ 1.22
VEGFA-204ENST00000372064 SAMD1Q6SPF0 538 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms