RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
PHTF1-204ENST00000369604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.73■□□□□ 0.11
PHTF1-204ENST00000369604 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
PHTF1-204ENST00000369604 PARP4Q9UKK3 1724 aaKnown RBP15.73■□□□□ 0.11
PHTF1-204ENST00000369604 DIAPH2O60879 1101 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 CAND2O75155 1236 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 PRPF4BQ13523 1007 aaKnown RBP15.72■□□□□ 0.11
PHTF1-204ENST00000369604 RCSD1Q6JBY9 416 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 LMBR1Q8WVP7 490 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 PBKQ96KB5 322 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 SPATS2LQ9NUQ6 558 aaKnown RBP15.72■□□□□ 0.11
PHTF1-204ENST00000369604 KCNG1Q9UIX4 513 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 CD2APQ9Y5K6 639 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 UHMK1Q8TAS1 419 aaKnown RBP15.72■□□□□ 0.11
PHTF1-204ENST00000369604 AK8Q96MA6 479 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 LRRC4CQ9HCJ2 640 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 C15orf41Q9Y2V0 281 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 ENO4A6NNW6 628 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 ERMARDQ5T6L9 678 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 PEX26Q7Z412 305 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 ADAT2Q7Z6V5 191 aaKnown RBP15.72■□□□□ 0.11
PHTF1-204ENST00000369604 DAAM2Q86T65 1068 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 EDEM3Q9BZQ6 932 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 BATF3Q9NR55 127 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 TRPC6Q9Y210 931 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 STK38LQ9Y2H1 464 aa15.72■□□□□ 0.11
PHTF1-204ENST00000369604 MYMKA6NI61 221 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 EIF4E1BA6NMX2 242 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 F8VZ95 297 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 KIF3CO14782 793 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 PAEPP09466 180 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 MYBP10242 640 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 HOOK3Q86VS8 718 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 PANK4Q9NVE7 773 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 NOP53Q9NZM5 478 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 FLT1P17948 1338 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 FAM170AA1A519 330 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 LAD1O00515 517 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 IFI16Q16666 785 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 METTL13Q8N6R0 699 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 GLIS3Q8NEA6 775 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 AGAP11Q8TF27 550 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
PHTF1-204ENST00000369604 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 INTS9Q9NV88 658 aaKnown RBP15.71■□□□□ 0.11
PHTF1-204ENST00000369604 HGSO14964 777 aaPredicted RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 GYG1P46976 350 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 USP11P51784 963 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 LRRC63Q05C16 580 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 BZW1Q7L1Q6 419 aaKnown RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 FMO2Q99518 471 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 ASAP1Q9ULH1 1129 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 CYP2D6P10635 497 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 BRD2P25440 801 aaKnown RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 TRPM8Q7Z2W7 1104 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 GUF1Q8N442 669 aaKnown RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 EIF1ADQ8N9N8 165 aaKnown RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 DYDC1Q8WWB3 177 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 SAAL1Q96ER3 474 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 TMEM59LQ9UK28 342 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 NAPAP54920 295 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 TMED8Q6PL24 325 aaPredicted RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 NELFCDQ8IXH7 590 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 MAB21L3Q8N8X9 362 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
PHTF1-204ENST00000369604 RIOK1Q9BRS2 568 aaKnown RBP15.7■□□□□ 0.1
PHTF1-204ENST00000369604 RGS16O15492 202 aaPredicted RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 PRPHP41219 470 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 CCHCR1Q8TD31 782 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 PRMT1Q99873 361 aaKnown RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 NOL4O94818 638 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 MAP2K1Q02750 393 aaPredicted RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 DZIP3Q86Y13 1208 aaKnown RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 ACTRT1Q8TDG2 376 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 LARP4BQ92615 738 aaKnown RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 YIPF3Q9GZM5 350 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 EBF2Q9HAK2 575 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 CFAP73A6NFT4 308 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 CCDC188H7C350 402 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 KCNJ2P63252 427 aa15.69■□□□□ 0.1
PHTF1-204ENST00000369604 FKBP3Q00688 224 aaKnown RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 NONOQ15233 471 aaKnown RBP eCLIP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
PHTF1-204ENST00000369604 LRRC55Q6ZSA7 311 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms