RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
PHGDH-201ENST00000369407 SH3GLB2Q9NR46 395 aa13.47□□□□□ -0.25
PHGDH-201ENST00000369407 BAIAP2L1Q9UHR4 511 aa13.47□□□□□ -0.25
PHGDH-201ENST00000369407 TLDC2A0PJX2 215 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 PRPHP41219 470 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 DHX9Q08211 1270 aaKnown RBP13.46□□□□□ -0.25
PHGDH-201ENST00000369407 GRM4Q14833 912 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 ECM1Q16610 540 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 ARFGAP2Q8N6H7 521 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 HVCN1Q96D96 273 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 CEP72Q9P209 647 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 RNF14Q9UBS8 474 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 ATP8A1Q9Y2Q0 1164 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 KRIT1O00522 736 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 PTK2Q05397 1052 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 METTL13Q8N6R0 699 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 AK8Q96MA6 479 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
PHGDH-201ENST00000369407 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 COL4A3BPQ9Y5P4 624 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
PHGDH-201ENST00000369407 KIF4AO95239 1232 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 ADAMTS2O95450 1211 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 CDC25CP30307 473 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 PPP1R7Q15435 360 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 EMC10Q5UCC4 262 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 HIBCHQ6NVY1 386 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-201ENST00000369407 GUF1Q8N442 669 aaKnown RBP13.46□□□□□ -0.26
PHGDH-201ENST00000369407 TSG101Q99816 390 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 GOPCQ9HD26 462 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.26
PHGDH-201ENST00000369407 NR2E1Q9Y466 385 aa13.46□□□□□ -0.26
PHGDH-201ENST00000369407 RBAK-RBAKDNI3L0D1 243 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 ASIC2Q16515 512 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 CALCRLQ16602 461 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 MIEF2Q96C03 454 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 PIGSQ96S52 555 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 PLCH1Q4KWH8 1693 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 LAD1O00515 517 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 MYBP10242 640 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 EPS15P42566 896 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 ZNF571Q7Z3V5 609 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-201ENST00000369407 MYOCDQ8IZQ8 938 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 MAGEF1Q9HAY2 307 aa13.45□□□□□ -0.26
PHGDH-201ENST00000369407 MPHOSPH10O00566 681 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 SHBGP04278 402 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 SLC9A1P19634 815 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 GKAP1Q5VSY0 366 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 COA7Q96BR5 231 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 MINPP1Q9UNW1 487 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 F8W031 263 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 CAND2O75155 1236 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 CLTAP09496 248 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 LRRC63Q05C16 580 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 WLSQ5T9L3 541 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 IQCDQ96DY2 449 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 LUC7LQ9NQ29 371 aaKnown RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 TMEM59LQ9UK28 342 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 NTSR2O95665 410 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 COASYQ13057 564 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 PLCB4Q15147 1175 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 SH3RF3Q8TEJ3 882 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 TATDN2Q93075 761 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 ARPP21Q9UBL0 812 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-201ENST00000369407 L3MBTL1Q9Y468 752 aa13.44□□□□□ -0.26
PHGDH-201ENST00000369407 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 FKBP3Q00688 224 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms