RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 SYNCQ9H7C4 482 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 NOP53Q9NZM5 478 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 UBN2Q6ZU65 1347 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 ZSCAN5CA6NGD5 496 aaPredicted RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 PGRMC1O00264 195 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 EXOC3O60645 756 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 RPL13P26373 211 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 PRDX5P30044 214 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 VWA3BQ502W6 1294 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 HDAC7Q8WUI4 952 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 ACTR5Q9H9F9 607 aaPredicted RBP11.75□□□□□ -0.53
EBF3-202ENST00000368648 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
EBF3-202ENST00000368648 GFPT2O94808 682 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 GDF11O95390 407 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 NR1I3Q14994 352 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 MIGA2Q7L4E1 593 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 TEX2Q8IWB9 1127 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 LACRTQ9GZZ8 138 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 BSDC1Q9NW68 430 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 FBXL5Q9UKA1 691 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 NEDD4P46934 1319 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 NMT2O60551 498 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 CIB2O75838 187 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ITPK1Q13572 414 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 FAM26FQ5R3K3 315 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 KAZNQ674X7 775 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 SDCCAG8Q86SQ7 713 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 OSBPL1AQ9BXW6 950 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 PSD3Q9NYI0 1048 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 LIMA1Q9UHB6 759 aaKnown RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ABL1P00519 1130 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 PSMC4P43686 418 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 RASSF2P50749 326 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 MYCT1Q8N699 235 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 SLC4A7Q9Y6M7 1214 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ADGRB1O14514 1584 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ERVK-24P63145 666 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 STXBP4Q6ZWJ1 553 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ZC3H18Q86VM9 953 aaKnown RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 DNAAF5Q86Y56 855 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 BEGAINQ9BUH8 593 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 PLCB1Q9NQ66 1216 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
EBF3-202ENST00000368648 FRMD4BQ9Y2L6 1034 aa11.74□□□□□ -0.53
EBF3-202ENST00000368648 A0A1B0GTH6 734 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 LGALS16A8MUM7 142 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 FCER1AP12319 257 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 ALAS1P13196 640 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 ADRA2BP18089 450 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 PPP2R5DQ14738 602 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 ETNK1Q9HBU6 452 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 RASGRF2O14827 1237 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 ATP5DP30049 168 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
EBF3-202ENST00000368648 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
EBF3-202ENST00000368648 GADL1Q6ZQY3 521 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 MEIS1O00470 390 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 MDH1P40925 334 aaKnown RBP11.73□□□□□ -0.53
EBF3-202ENST00000368648 MCAMP43121 646 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
EBF3-202ENST00000368648 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
EBF3-202ENST00000368648 ZBED4O75132 1171 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 NR2F2P24468 414 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 CCNE1P24864 410 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 KIF22Q14807 665 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
EBF3-202ENST00000368648 KIF9Q9HAQ2 790 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms