RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 TXKP42681 527 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 ME1P48163 572 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 CACNB2Q08289 660 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 KRT79Q5XKE5 535 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 TAPT1Q6NXT6 567 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 FOXD4L3Q6VB84 417 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 OR6J1Q8NGC5 347 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 RASSF8Q8NHQ8 419 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
LAMA4-204ENST00000368640 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
LAMA4-204ENST00000368640 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ELP1O95163 1332 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ADAMTS3O15072 1205 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 SLC37A4O43826 429 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 PSAPP07602 524 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ZNF865P0CJ78 1059 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ARP10275 920 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 UBA7P41226 1012 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 FAM160B1Q5W0V3 765 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 MIER3Q7Z3K6 550 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 RNF180Q86T96 592 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 TLK2Q86UE8 772 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ETNPPLQ8TBG4 499 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
LAMA4-204ENST00000368640 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
LAMA4-204ENST00000368640 VWA3AA6NCI4 1184 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 RGS20O76081 388 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 IGHA2P01877 340 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 KCNA2P16389 499 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 MUTP22033 750 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 SLC26A2P50443 739 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 DGKDQ16760 1214 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 LY6KQ17RY6 165 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 FAM173BQ6P4H8 233 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 CCDC62Q6P9F0 684 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 CYFIP1Q7L576 1253 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 PPTC7Q8NI37 304 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 LENG9Q96B70 501 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
LAMA4-204ENST00000368640 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 MTMR9Q96QG7 549 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.2□□□□□ -0.3
LAMA4-204ENST00000368640 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 XPNPEP3Q9NQH7 507 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 PCDHA10Q9Y5I2 948 aa13.2□□□□□ -0.3
LAMA4-204ENST00000368640 TCHHQ07283 1943 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 BACH1O14867 736 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 MAP3K13O43283 966 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 PSMD10O75832 226 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 TECP42680 631 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 NBR1Q14596 966 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 NCAPH2Q6IBW4 605 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-204ENST00000368640 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 RNF208Q9H0X6 261 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 DISC1Q9NRI5 854 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 NR2E3Q9Y5X4 410 aa13.19□□□□□ -0.3
LAMA4-204ENST00000368640 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 DDX39AO00148 427 aaKnown RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 DYNC1LI2O43237 492 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 CHMP2AO43633 222 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 CABYRO75952 493 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 C6orf222P0C671 652 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms