RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 GTPBP10A4D1E9 387 aaKnown RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 TBCAO75347 108 aaKnown RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 EYA4O95677 639 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 ZNF76P36508 570 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 MAGEA1P43355 309 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 SF3B2Q13435 895 aaKnown RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 HSP90B2PQ58FF3 399 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 BEND6Q5SZJ8 279 aaPredicted RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 USP17L6PQ6QN14 398 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 RRAGAQ7L523 313 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 BAP1Q92560 729 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 KCTD10Q9H3F6 313 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 ARMCX3Q9UH62 379 aaPredicted RBP11.27□□□□□ -0.61
TPM3-209ENST00000368527 SNX12Q9UMY4 172 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 HYOU1Q9Y4L1 999 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
TPM3-209ENST00000368527 SIPA1L1O43166 1804 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 LRRC53A6NM62 1247 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 POTECB2RU33 542 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 CES2O00748 559 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 EIF4A3P38919 411 aaKnown RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 TCP10Q12799 353 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 ADAM9Q13443 819 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 ALCAMQ13740 583 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 PRR16Q569H4 304 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 VPS36Q86VN1 386 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 CATSPER3Q86XQ3 398 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 MMGT1Q8N4V1 131 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 OGFOD1Q8N543 542 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 C7orf43Q8WVR3 580 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 PSMD1Q99460 953 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPM3-209ENST00000368527 FAM207AQ9NSI2 230 aaPredicted RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 MAP3K20Q9NYL2 800 aaKnown RBP11.26□□□□□ -0.61
TPM3-209ENST00000368527 ARHGAP20Q9P2F6 1191 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
TPM3-209ENST00000368527 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
TPM3-209ENST00000368527 E9PMD0 336 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 RAD21O60216 631 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 MED24O75448 989 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 GH2P01242 217 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 AFPP02771 609 aaKnown RBP11.25□□□□□ -0.61
TPM3-209ENST00000368527 CCDC172P0C7W6 258 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 EPB41P11171 864 aaKnown RBP11.25□□□□□ -0.61
TPM3-209ENST00000368527 PPP2R5CQ13362 524 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 GIT2Q14161 759 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 ECM1Q16610 540 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 ASTE1Q2TB18 679 aaPredicted RBP11.25□□□□□ -0.61
TPM3-209ENST00000368527 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 NCAPH2Q6IBW4 605 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
TPM3-209ENST00000368527 NIPA1Q7RTP0 329 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 FAM71BQ8TC56 605 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 EXOC4Q96A65 974 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 JADE2Q9NQC1 790 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 ODF2LQ9ULJ1 636 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
TPM3-209ENST00000368527 GRID2IPA4D2P6 1211 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms