RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 IL1R1P14778 569 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 SMARCA1P28370 1054 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-202ENST00000367279 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 ZNF713Q8N859 430 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-202ENST00000367279 ARL8AQ96BM9 186 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 CAPS2Q9BXY5 557 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 ZC3H12CQ9C0D7 883 aaKnown RBP13.57□□□□□ -0.24
PTPN7-202ENST00000367279 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
PTPN7-202ENST00000367279 KCNK3O14649 394 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 KRT14P02533 472 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 GLI1P08151 1106 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 KCNH2Q12809 1159 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 CFAP58Q5T655 872 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 IFT20Q8IY31 132 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 PROM2Q8N271 834 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
PTPN7-202ENST00000367279 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
PTPN7-202ENST00000367279 NOL4O94818 638 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 SLC9A1P19634 815 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 MED24O75448 989 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 COBLL1Q53SF7 1204 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
PTPN7-202ENST00000367279 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-202ENST00000367279 SSU72P8A0A1W2PR75 194 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 CLIC2O15247 247 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 FAM153BP0C7A2 387 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 FAM153CQ494X1 144 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 CEP104O60308 925 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 ZNF76P36508 570 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 IRAK1P51617 712 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 CASP5P51878 434 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 PSMC6P62333 389 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 NFIAQ12857 509 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 PPFIA1Q13136 1202 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 PDCLQ13371 301 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 TRADDQ15628 312 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 ZIM3Q96PE6 472 aa13.55□□□□□ -0.24
PTPN7-202ENST00000367279 SHTN1A0MZ66 631 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 PRLRP16471 622 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 CYP11B2P19099 503 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 USP21Q9UK80 565 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 PJA2O43164 708 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 LCA5LO95447 670 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 ASTE1Q2TB18 679 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 GPATCH4Q5T3I0 446 aaKnown RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 RNF10Q8N5U6 811 aaKnown RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 FAM107BQ9H098 131 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 ARMCX3Q9UH62 379 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-202ENST00000367279 SHMT1P34896 483 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 RPS6KA1Q15418 735 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 MICALL1Q8N3F8 863 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 GAKO14976 1311 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 ABCB11O95342 1321 aa13.54□□□□□ -0.24
PTPN7-202ENST00000367279 EBAG9O00559 213 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 CHMP2AO43633 222 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 BBOX1O75936 387 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 GCNT3O95395 438 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 GNA14O95837 355 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 HOXA13P31271 388 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 PTK2Q05397 1052 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 PAK2Q13177 524 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 NNTQ13423 1086 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 NAB2Q15742 525 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 SLFN13Q68D06 897 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 BCAS3Q9H6U6 928 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 DNM3Q9UQ16 869 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 GDF11O95390 407 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms