RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 COPEO14579 308 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 MAST1Q9Y2H9 1570 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 SNX2O60749 519 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 CNBD1Q8NA66 436 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ITGA6P23229 1130 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 KRT28Q7Z3Y7 464 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 BLOC1S6Q9UL45 172 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 MYO1EQ12965 1108 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 EFTUD2Q15029 972 aaKnown RBP eCLIP9.98□□□□□ -0.812e-7■■■■□ 23.8
VPS13A-203ENST00000360280 FAM160B1Q5W0V3 765 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TEKT3Q9BXF9 490 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 FBXO2Q9UK22 296 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 H0YC42 278 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 CDH2P19022 906 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TFDP1Q14186 410 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 IMPG1Q17R60 797 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ABHD8Q96I13 439 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 BTBD6Q96KE9 485 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 OSBPL1AQ9BXW6 950 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TECP42680 631 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TTLL7Q6ZT98 887 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TBC1D1Q86TI0 1168 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 SMCR8Q8TEV9 937 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TM6SF1Q9BZW5 370 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 PPARGC1AQ9UBK2 798 aaKnown RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 CPA1P15085 419 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 GAP43P17677 238 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 MAP4P27816 1152 aaKnown RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 EPM2AIP1Q7L775 607 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 TJP3O95049 919 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 PPP4R4Q6NUP7 873 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ADCK1Q86TW2 530 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ZFYVE19Q96K21 471 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ADCY9O60503 1353 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ENC1O14682 589 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 CMA1P23946 247 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 POLD1P28340 1107 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 HIF1AQ16665 826 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 XAGE2Q96GT9 111 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 AS3MTQ9HBK9 375 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 FANCLQ9NW38 375 aa9.98□□□□□ -0.81
VPS13A-203ENST00000360280 E7EWF7 191 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SLCO1A2P46721 670 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 RMDN2Q96LZ7 410 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 KCNJ14Q9UNX9 436 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 EYA2O00167 538 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SEC31AO94979 1220 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SERPINB1P30740 379 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SCG3Q8WXD2 468 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 LPIN2Q92539 896 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 C10orf88Q9H8K7 445 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 PRG3Q9Y2Y8 225 aaPredicted RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 CCDC188H7C350 402 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 RASSF9O75901 435 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ANP32DO95626 131 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 LUZP2Q86TE4 346 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ARHGEF25Q86VW2 580 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 MAPRE2Q15555 327 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 HORMAD1Q86X24 394 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ZNF654Q8IZM8 581 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 NDUFAF2Q8N183 169 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 LARP4BQ92615 738 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 STAMQ92783 540 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 LRRIQ4A6NIV6 560 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 MYO1CO00159 1063 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ZSCAN9O15535 394 aaPredicted RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 AFPP02771 609 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 DCDC2Q9UHG0 476 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 STXBP3O00186 592 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 PRPSAP2O60256 369 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 HIBADHP31937 336 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 HDLBPQ00341 1268 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 NR5A1Q13285 461 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 FBXO18Q8NFZ0 1043 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 KRT16P08779 473 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 AARS2Q5JTZ9 985 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 EML4Q9HC35 981 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 PKD2L2Q9NZM6 624 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 PJA2O43164 708 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ZBED1O96006 694 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 TESK2Q96S53 571 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 KCNA1Q09470 495 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 HIPK4Q8NE63 616 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms