RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 CEP170P1Q96L14 293 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 COPB2P35606 906 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 LONRF3Q496Y0 759 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ZNF658Q5TYW1 1059 aaPredicted RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 ADAT2Q7Z6V5 191 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 IL1RL1Q01638 556 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 ZMYND12Q9H0C1 365 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SERTAD1Q9UHV2 236 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 MAN2A1Q16706 1144 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 DNAJC10Q8IXB1 793 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SEPT8Q92599 483 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 TESK2Q96S53 571 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CARMIL3Q8ND23 1372 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 FAM95CA0A1B0GW59 222 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 YWHAHQ04917 246 aaPredicted RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 RWDD4Q6NW29 188 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 DARS2Q6PI48 645 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CENPUQ71F23 418 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SH3GLB2Q9NR46 395 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 POC1B-GALNT4F8VUJ3 575 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 KRT37O76014 449 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 PDE8BO95263 885 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 RTKN2Q8IZC4 609 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 LRRC47Q8N1G4 583 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 TRAIPQ9BWF2 469 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SPAG17Q6Q759 2223 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 HSPD1P10809 573 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 EEF1B2P24534 225 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 POLR2FP61218 127 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 DALRD3Q5D0E6 543 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 TEDDM1Q5T9Z0 273 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 TTC8Q8TAM2 541 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 OTUB1Q96FW1 271 aaPredicted RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 GOLGA8TH3BQL2 631 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 LMNAP02545 664 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SIK1P57059 783 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 ETF1P62495 437 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 TBCCQ15814 346 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 TMCO5AQ8N6Q1 288 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 MSTO1Q9BUK6 570 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 MYO3BQ8WXR4 1341 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CUL1Q13616 776 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CYP26B1Q9NR63 512 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 STRIP2Q9ULQ0 834 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 SLC12A1Q13621 1099 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 MESDQ14696 234 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 KIRREL3Q8IZU9 778 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 MYL10Q9BUA6 226 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 MYOM2P54296 1465 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 NPR1P16066 1061 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 EEF1DP29692 281 aaKnown RBP10.41□□□□□ -0.74
CUX1-203ENST00000360264 OCRLQ01968 901 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 CAV1Q03135 178 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 FBXO40Q9UH90 709 aa10.41□□□□□ -0.74
CUX1-203ENST00000360264 DPYSL4O14531 572 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 SPOPLQ6IQ16 392 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 OR9Q1Q8NGQ5 310 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 NDE1Q9NXR1 346 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PCDHA7Q9UN72 937 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 SYNJ2BP-COX16A0A087WUM0 186 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 SMARCA1P28370 1054 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 FSCBQ5H9T9 825 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 DEPDC1BQ8WUY9 529 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 DNAJC17Q9NVM6 304 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 COX16Q9P0S2 106 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PBRM1Q86U86 1689 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 ARL4CP56559 192 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 RNF217Q8TC41 542 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PRRC2BQ5JSZ5 2229 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 GYG1P46976 350 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PDIK1LQ8N165 341 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 RGS12O14924 1447 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 BRD1O95696 1058 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 SUN2Q9UH99 717 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 ASNSP08243 561 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 ANGPTL8Q6UXH0 198 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 ACAD11Q709F0 780 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 TACO1Q9BSH4 297 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 INTS9Q9NV88 658 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 ZBED1O96006 694 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 VEPH1Q14D04 833 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 PANX2Q96RD6 677 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 MRGBPQ9NV56 204 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 FANCLQ9NW38 375 aa10.4□□□□□ -0.74
CUX1-203ENST00000360264 ENOX1Q8TC92 643 aaKnown RBP10.4□□□□□ -0.74
CUX1-203ENST00000360264 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 SYF2O95926 243 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms