RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 FAM160B2Q86V87 743 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 LDHDQ86WU2 507 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 ETNPPLQ8TBG4 499 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 LPAR1Q92633 364 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 MBOAT7Q96N66 472 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 SYNRGQ9UMZ2 1314 aa20.59■□□□□ 0.89
SNX11-201ENST00000359238 WDR46O15213 610 aaKnown RBP20.58■□□□□ 0.89
SNX11-201ENST00000359238 FCER1AP12319 257 aa20.58■□□□□ 0.89
SNX11-201ENST00000359238 SREBF1P36956 1147 aa20.58■□□□□ 0.89
SNX11-201ENST00000359238 GSCP56915 257 aaPredicted RBP20.58■□□□□ 0.89
SNX11-201ENST00000359238 PCDHA12Q9UN75 941 aa20.58■□□□□ 0.89
SNX11-201ENST00000359238 MYMKA6NI61 221 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 SPDYE3A6NKU9 549 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 USP2O75604 605 aaPredicted RBP20.58■□□□□ 0.88
SNX11-201ENST00000359238 EPHX2P34913 555 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 AP3B2Q13367 1082 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 ZNF658Q5TYW1 1059 aaPredicted RBP20.58■□□□□ 0.88
SNX11-201ENST00000359238 ZNF280CQ8ND82 737 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 EEF2KMTQ96G04 330 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 COL20A1Q9P218 1284 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 DACH1Q9UI36 760 aa20.58■□□□□ 0.88
SNX11-201ENST00000359238 CYP3A7-CYP3A51PA0A087WV96 503 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 PRPF6O94906 941 aaKnown RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 CYP3A7P24462 503 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 ERCC5P28715 1186 aaPredicted RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 USP11P51784 963 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 BACE1P56817 501 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 CPXCR1Q8N123 301 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 SECISBP2LQ93073 1101 aaKnown RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 L3MBTL3Q96JM7 780 aaPredicted RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 SLF1Q9BQI6 1058 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 RPAP3Q9H6T3 665 aaPredicted RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 COL11A1P12107 1806 aaPredicted RBP20.57■□□□□ 0.88
SNX11-201ENST00000359238 RLFQ13129 1914 aa20.57■□□□□ 0.88
SNX11-201ENST00000359238 NFIBO00712 420 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 PLA2G6O60733 806 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 FLOT1O75955 427 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 SYF2O95926 243 aaKnown RBP20.56■□□□□ 0.88
SNX11-201ENST00000359238 HMGCS2P54868 508 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 STK4Q13043 487 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 DYMQ7RTS9 669 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNX11-201ENST00000359238 PYM1Q9BRP8 204 aaKnown RBP20.56■□□□□ 0.88
SNX11-201ENST00000359238 WDR18Q9BV38 432 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 GLT8D2Q9H1C3 349 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 A0A1B0GTH6 734 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 PDIA5Q14554 519 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 EAPPQ56P03 285 aaPredicted RBP20.56■□□□□ 0.88
SNX11-201ENST00000359238 MICALL1Q8N3F8 863 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 GLIS3Q8NEA6 775 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 NAPGQ99747 312 aaPredicted RBP20.56■□□□□ 0.88
SNX11-201ENST00000359238 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
SNX11-201ENST00000359238 POTEB3A0JP26 581 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 POTECB2RU33 542 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 PIK3CDO00329 1044 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 MSH4O15457 936 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 GCFC2P16383 781 aaKnown RBP20.55■□□□□ 0.88
SNX11-201ENST00000359238 TMEM266Q2M3C6 531 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 POTEBQ6S5H4 581 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 PLEKHA4Q9H4M7 779 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 RAVER2Q9HCJ3 691 aaKnown RBP20.55■□□□□ 0.88
SNX11-201ENST00000359238 HOMER2Q9NSB8 354 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 IGLV3-22A0A075B6J6 115 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 E9PMD0 336 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNX11-201ENST00000359238 TEX33O43247 280 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 MARCH6O60337 910 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 MED24O75448 989 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 USP14P54578 494 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 VGLL4Q14135 290 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 TMEM119Q4V9L6 283 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 SLC35F6Q8N357 371 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 GPATCH11Q8N954 259 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 PRPF38AQ8NAV1 312 aaKnown RBP20.55■□□□□ 0.88
SNX11-201ENST00000359238 NELFBQ8WX92 580 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 CALML4Q96GE6 196 aa20.55■□□□□ 0.88
SNX11-201ENST00000359238 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
SNX11-201ENST00000359238 A0A0U1RQJ8 604 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 SHOX2O60902 331 aaPredicted RBP20.54■□□□□ 0.88
SNX11-201ENST00000359238 ASIC1P78348 528 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 SPATA1Q5VX52 437 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.54■□□□□ 0.88
SNX11-201ENST00000359238 ATRIPQ8WXE1 791 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 LARP4BQ92615 738 aaKnown RBP20.54■□□□□ 0.88
SNX11-201ENST00000359238 RHOBTB3O94955 611 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 CDKAL1Q5VV42 579 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 USP50Q70EL3 339 aaPredicted RBP20.54■□□□□ 0.88
SNX11-201ENST00000359238 PPFIBP1Q86W92 1011 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 MYO1AQ9UBC5 1043 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 CCPG1Q9ULG6 757 aa20.54■□□□□ 0.88
SNX11-201ENST00000359238 RBBP6Q7Z6E9 1792 aaKnown RBP20.53■□□□□ 0.88
SNX11-201ENST00000359238 ERLIN2O94905 339 aa20.53■□□□□ 0.88
SNX11-201ENST00000359238 PSMC6P62333 389 aa20.53■□□□□ 0.88
SNX11-201ENST00000359238 KRT79Q5XKE5 535 aa20.53■□□□□ 0.88
SNX11-201ENST00000359238 MOB2Q70IA6 237 aa20.53■□□□□ 0.88
SNX11-201ENST00000359238 ADSSL1Q8N142 457 aa20.53■□□□□ 0.88
SNX11-201ENST00000359238 KIAA0895Q8NCT3 520 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms