RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 FAM81BQ96LP2 452 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ATP10BO94823 1461 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PPP4R3CPQ6ZMV5 832 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF277Q9NRM2 450 aaPredicted RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 TET3O43151 1660 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 UHRF1BP1LA0JNW5 1464 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 WDR91A4D1P6 747 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 GAS7O60861 476 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 FAM107AO95990 144 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 SLC1A4P43007 532 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PSMC1P62191 440 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NFRKBQ6P4R8 1299 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 SRRM1Q8IYB3 904 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 HNRNPLLQ8WVV9 542 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 HDAC6Q9UBN7 1215 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 IPO11Q9UI26 975 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ARL2BPQ9Y2Y0 163 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 CCDC159P0C7I6 412 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 TPH2Q8IWU9 490 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 HDAC11Q96DB2 347 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 AZI2Q9H6S1 392 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 AOC3Q16853 763 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 NDST4Q9H3R1 872 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SMYD2Q9NRG4 433 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TMOD4Q9NZQ9 345 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SYCE1LA8MT33 242 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 DAB2IPQ5VWQ8 1189 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 RAPH1Q70E73 1250 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PDZD4Q76G19 769 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 RHOT2Q8IXI1 618 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PDIK1LQ8N165 341 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 EAF2Q96CJ1 260 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ABCC10Q5T3U5 1492 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ATP10DQ9P241 1426 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 AP1B1Q10567 949 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 K7ENM7 598 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SLC44A4Q53GD3 710 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 C3orf20Q8ND61 904 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PCDH11XQ9BZA7 1347 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 DNAJC6O75061 913 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SYF2O95926 243 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 HSPA9P38646 679 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TEDDM1Q5T9Z0 273 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TRPM8Q7Z2W7 1104 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 CYFIP2Q96F07 1278 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PAGE5Q96GU1 130 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SGSM3Q96HU1 749 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ITSN1Q15811 1721 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 KRT37O76014 449 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 HAUS5O94927 633 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ZAP70P43403 619 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PMS2P54278 862 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TMPRSS15P98073 1019 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 E4F1Q66K89 784 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PYROXD1Q8WU10 500 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TNKSO95271 1327 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 LRRN2O75325 713 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 PYGBP11216 843 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 KPNB1Q14974 876 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 WDR75Q8IWA0 830 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 AGGF1Q8N302 714 aaeCLIP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 WARS2Q9UGM6 360 aaKnown RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TRPC5Q9UL62 973 aaPredicted RBP9.43□□□□□ -0.9
COL6A6-201ENST00000358511 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 TCP11X1B4DZS4 312 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 KRT75O95678 551 aa9.43□□□□□ -0.9
COL6A6-201ENST00000358511 FAM170AA1A519 330 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 EXOC5O00471 708 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MFAP3P55082 362 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 PTK2Q05397 1052 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 KRT39Q6A163 491 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MAEAQ7L5Y9 396 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 RASSF3Q86WH2 238 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 PRMT1Q99873 361 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ARHGEF10LQ9HCE6 1279 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CAPN11Q9UMQ6 739 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ESRRBO95718 433 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms