RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 TDRD7Q8NHU6 1098 aaKnown RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 AS3MTQ9HBK9 375 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 ABCB6Q9NP58 842 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 MAN1B1Q9UKM7 699 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 C1orf146Q5VVC0 180 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 GCP02774 474 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 KCNA4P22459 653 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 CLCN6P51797 869 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 TMPRSS15P98073 1019 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 FAM160B1Q5W0V3 765 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 KIAA2013Q8IYS2 634 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 HEXIM2Q96MH2 286 aaKnown RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 TTC1Q99614 292 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 VCPP55072 806 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 KCNG1Q9UIX4 513 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 PRPSAP2O60256 369 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 SEC24DO94855 1032 aaPredicted RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 CHEK2O96017 543 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 EIF4A3P38919 411 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 CTSWP56202 376 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 DDX28Q9NUL7 540 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 CREB3O43889 395 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 BTDP43251 543 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 LZICQ8WZA0 190 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 PITPNM3Q9BZ71 974 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 CNOT10Q9H9A5 744 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 STK32BQ9NY57 414 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 CDC25AP30304 524 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 SLC16A2P36021 539 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 DRP2Q13474 957 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 ACTR5Q9H9F9 607 aaPredicted RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
COL11A1-202ENST00000358392 SAYSD1Q9NPB0 183 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 NRBP2Q9NSY0 501 aa12.04□□□□□ -0.48
COL11A1-202ENST00000358392 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 MMEP08473 750 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF507Q8TCN5 953 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 TUBB6Q9BUF5 446 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 PFKFB2O60825 505 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 MARK3P27448 753 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 CDC25BP30305 580 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 PDCD6IPQ8WUM4 868 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 TRPM2O94759 1503 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 IQANK1A0A1B0GTG1 560 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 VCAM1P19320 739 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 HNRNPH2P55795 449 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 CASP8Q14790 479 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 AOC3Q16853 763 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 GAS2L3Q86XJ1 694 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ADA2Q9NZK5 511 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SLC12A6Q9UHW9 1150 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SNAP25P60880 206 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ICA1Q05084 483 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 EEPD1Q7L9B9 569 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 NAF1Q96HR8 494 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 KIFC3Q9BVG8 833 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ZFP69BQ9UJL9 534 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 KDM1AO60341 852 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 NEK2P51955 445 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 STAT2P52630 851 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 PDCLQ13371 301 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 MDH1BQ5I0G3 518 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 P2RX5Q93086 422 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 DCTN4Q9UJW0 460 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 SNX5Q9Y5X3 404 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 CARSP49589 748 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 AGR3Q8TD06 166 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 CYP4F11Q9HBI6 524 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 NOP53Q9NZM5 478 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
COL11A1-202ENST00000358392 FBXL5Q9UKA1 691 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 LRFN2Q9ULH4 789 aa12.03□□□□□ -0.48
COL11A1-202ENST00000358392 ZBED1O96006 694 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms