RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MARCH6O60337 910 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 TSR1Q2NL82 804 aaKnown RBP15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 ZNF569Q5MCW4 686 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 ACRBPQ8NEB7 543 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 SLC39A2Q9NP94 309 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 CAPN11Q9UMQ6 739 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 ZHX2Q9Y6X8 837 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 A0A0U1RQJ8 604 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 TTC26A0AVF1 554 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 MANSC4A6NHS7 340 aaPredicted RBP15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L15C9J2P7 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L13C9JLJ4 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L11C9JVI0 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L18D6R9N7 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L22D6RA61 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L17D6RBQ6 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L19D6RCP7 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L20D6RJB6 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 CHMP4BP1P59074 171 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L24Q0WX57 530 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 BRD3Q15059 726 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 TERF2Q15554 542 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 WHAMMP3Q1A5X7 153 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 CENPPQ6IPU0 288 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 USP17L6PQ6QN14 398 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 ZNF662Q6ZS27 426 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 DYMQ7RTS9 669 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 KCNK18Q7Z418 384 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 NAPGQ99747 312 aaPredicted RBP15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 ANO3Q9BYT9 981 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 LUC7L2Q9Y383 392 aaKnown RBP15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 KDM3AQ9Y4C1 1321 aa15.86■□□□□ 0.13
NIPAL3-203ENST00000358028 GH2P01242 217 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 TUBBP07437 444 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 TM4SF4P48230 202 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 USP11P51784 963 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 HYIQ5T013 277 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 CC2D1AQ6P1N0 951 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 BRI3BPQ8WY22 251 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 RNF186Q9NXI6 227 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 KCNH4Q9UQ05 1017 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 AFG3L2Q9Y4W6 797 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 CCL15-CCL14A0A0B4J2E2 113 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 CCDC151A5D8V7 595 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 F5H6K3 240 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 IGF2BP3O00425 579 aaKnown RBP eCLIP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 SLC26A4O43511 780 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 ASNSP08243 561 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 ARHGAP25P42331 645 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 GTF2A2P52657 109 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 KLRC3Q07444 240 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 PSMD2Q13200 908 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 AP3B2Q13367 1082 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 ECM1Q16610 540 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 CCL15Q16663 113 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 MCTP2Q6DN12 878 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 GUF1Q8N442 669 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 DDX12PQ92771 950 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 MBOAT7Q96N66 472 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 PTPN18Q99952 460 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 IRX2Q9BZI1 471 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 PCDHA12Q9UN75 941 aa15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 EPN1Q9Y6I3 576 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-203ENST00000358028 CYP3A7-CYP3A51PA0A087WV96 503 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 TESPA1A2RU30 521 aaPredicted RBP15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 NDUFA10O95299 355 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 NDUFB10O96000 172 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 CYP3A7P24462 503 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 EHHADHQ08426 723 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 SNAPC2Q13487 334 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 MEA1Q16626 185 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 FIGNQ5HY92 759 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 MIIPQ5JXC2 388 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 SLC35F6Q8N357 371 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 GJA10Q969M2 543 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 NOC4LQ9BVI4 516 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 PARD6BQ9BYG5 372 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 NT5C3AQ9H0P0 336 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 KCNMB3Q9NPA1 279 aa15.84■□□□□ 0.13
NIPAL3-203ENST00000358028 IDEP14735 1019 aa15.83■□□□□ 0.12
NIPAL3-203ENST00000358028 PLA2G4AP47712 749 aa15.83■□□□□ 0.12
NIPAL3-203ENST00000358028 KRT83P78385 493 aa15.83■□□□□ 0.12
NIPAL3-203ENST00000358028 TBC1D8BQ0IIM8 1120 aa15.83■□□□□ 0.12
NIPAL3-203ENST00000358028 SYDE2Q5VT97 1194 aa15.83■□□□□ 0.12
NIPAL3-203ENST00000358028 FBXO11Q86XK2 927 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms