RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 IRAK4Q9NWZ3 460 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 PSMC2P35998 433 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 C1orf146Q5VVC0 180 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 NACC1Q96RE7 527 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 ADD3Q9UEY8 706 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 ZNF233A6NK53 670 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 SUPT20HL1Q3ZLR7 823 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 PCGF5Q86SE9 256 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 ZAP70P43403 619 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
SMC4-202ENST00000357388 SKA2Q8WVK7 121 aaPredicted RBP13.82□□□□□ -0.2
SMC4-202ENST00000357388 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
SMC4-202ENST00000357388 TESK2Q96S53 571 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 FOXP1Q9H334 677 aaPredicted RBP13.82□□□□□ -0.2
SMC4-202ENST00000357388 KRT1P04264 644 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 DIABLOQ9NR28 239 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 SLC13A4Q9UKG4 626 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 SEMA3EO15041 775 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 NDUFA10O95299 355 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 NPR1P16066 1061 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 NFKBIAP25963 317 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 AP1B1Q10567 949 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 PLA2G4DQ86XP0 818 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 PDIK1LQ8N165 341 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 DEPDC1BQ8WUY9 529 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 CHCHD3Q9NX63 227 aaKnown RBP13.82□□□□□ -0.2
SMC4-202ENST00000357388 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 ABCC10Q5T3U5 1492 aa13.82□□□□□ -0.2
SMC4-202ENST00000357388 H3BRJ5 948 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 HSPA4LO95757 839 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 SCG2P13521 617 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 PIK3CAP42336 1068 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 SERPINB4P48594 390 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 IFRD2Q12894 506 aaPredicted RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 CC2D1AQ6P1N0 951 aaPredicted RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 TRPV6Q9H1D0 765 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 DDX28Q9NUL7 540 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 PCDHA13Q9Y5I0 950 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 EFCAB14O75071 495 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 CTSWP56202 376 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 KRT24Q2M2I5 525 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 LRRC8BQ6P9F7 803 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 ZSCAN10Q96SZ4 725 aaPredicted RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 KLC4Q9NSK0 619 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 ZNF711Q9Y462 761 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 STXBP3O00186 592 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 ZMYND10O75800 440 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 TECP42680 631 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 CUL3Q13618 768 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 TBC1D23Q9NUY8 699 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 PPARGC1AQ9UBK2 798 aaKnown RBP13.81□□□□□ -0.2
SMC4-202ENST00000357388 L3MBTL1Q9Y468 752 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 PARD3BQ8TEW8 1205 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 PCDHA5Q9Y5H7 936 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
SMC4-202ENST00000357388 TMEM247A6NEH6 219 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 TCP10L2B9ZVM9 353 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 MOCS3O95396 460 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 OCRLQ01968 901 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 KLHL38Q2WGJ6 581 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 TAF1BQ53T94 588 aaPredicted RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 TRIM67Q6ZTA4 783 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SLC39A2Q9NP94 309 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PDHA1P08559 390 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 FAM47AQ5JRC9 791 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 BZW1Q7L1Q6 419 aaKnown RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 USP17L21D6R901 530 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SLCO1A2P46721 670 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PSMC1P62191 440 aaKnown RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms