RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EPHA7Q15375 998 aa20.33■□□□□ 0.85
SMARCD3-202ENST00000356800 UVSSAQ2YD98 709 aa20.33■□□□□ 0.85
SMARCD3-202ENST00000356800 SEPT14Q6ZU15 432 aa20.33■□□□□ 0.85
SMARCD3-202ENST00000356800 DYDC2Q96IM9 177 aa20.33■□□□□ 0.85
SMARCD3-202ENST00000356800 NT5C3AQ9H0P0 336 aa20.33■□□□□ 0.85
SMARCD3-202ENST00000356800 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 SLITRK3O94933 977 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 EEPD1Q7L9B9 569 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 LARP4BQ92615 738 aaKnown RBP20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 MAN1B1Q9UKM7 699 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 NFASCO94856 1347 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 E9PMD0 336 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 PSMC6P62333 389 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 CTTNQ14247 550 aaKnown RBP20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 MORN1Q5T089 497 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 ISM2Q6H9L7 571 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 MIER3Q7Z3K6 550 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 SMARCE1Q969G3 411 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 MPHOSPH6Q99547 160 aaKnown RBP20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 TUFT1Q9NNX1 390 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 TELO2Q9Y4R8 837 aa20.32■□□□□ 0.84
SMARCD3-202ENST00000356800 ASB14A6NK59 587 aa20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 BMP6P22004 513 aa20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 C11orf57Q6ZUT1 292 aaPredicted RBP20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 ZNF467Q7Z7K2 595 aaPredicted RBP20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 DNAJC25Q9H1X3 360 aa20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 WRAP73Q9P2S5 460 aaPredicted RBP20.31■□□□□ 0.84
SMARCD3-202ENST00000356800 SMC2O95347 1197 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 ZNF165P49910 485 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 NLRP12P59046 1061 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 KRT76Q01546 638 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 DPCR1Q3MIW9 517 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 SV2BQ7L1I2 683 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 ARMCX2Q7L311 632 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 DPP9Q86TI2 863 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 FBXO16Q8IX29 292 aaPredicted RBP20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 SENP7Q9BQF6 1050 aa20.3■□□□□ 0.84
SMARCD3-202ENST00000356800 MYMKA6NI61 221 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 ALDH1A1P00352 501 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 CTGFP29279 349 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 HTRA3P83110 453 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 ZNF746Q6NUN9 644 aaPredicted RBP20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 TPH2Q8IWU9 490 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 NPLOC4Q8TAT6 608 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 MAML3Q96JK9 1138 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 C7orf25Q9BPX7 421 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 TRIM9Q9C026 710 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 CBX8Q9HC52 389 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 DIS3Q9Y2L1 958 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 LOXHD1Q8IVV2 1947 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 KLRC4O43908 158 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 SORBS3O60504 671 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 MYL1P05976 194 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 UBA1P22314 1058 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 MORC3Q14149 939 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 MAMDC4Q6UXC1 1216 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 TRIML1Q8N9V2 468 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 BANK1Q8NDB2 785 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 GSDMAQ96QA5 445 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 LXNQ9BS40 222 aa20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 NAT10Q9H0A0 1025 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 JPH1Q9HDC5 661 aaPredicted RBP20.29■□□□□ 0.84
SMARCD3-202ENST00000356800 WDR64B1ANS9 1081 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 ARIH2O95376 493 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 PLA2G4BP0C869 781 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 MUTP22033 750 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 JAK3P52333 1124 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 MAP2K5Q13163 448 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 REM2Q8IYK8 340 aaPredicted RBP20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 NEK9Q8TD19 979 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 USP6NLQ92738 828 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 SAMM50Q9Y512 469 aa20.28■□□□□ 0.84
SMARCD3-202ENST00000356800 ZBTB39O15060 712 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 RPN1P04843 607 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 P4HBP07237 508 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 TGFB3P10600 412 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 SFNP31947 248 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 VEGFBP49765 207 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 SLC12A3P55017 1021 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 UGCGQ16739 394 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 CYFIP1Q7L576 1253 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 BPIFA3Q9BQP9 254 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 KATNBL1Q9H079 304 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 PDGFCQ9NRA1 345 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 DNM3Q9UQ16 869 aa20.27■□□□□ 0.84
SMARCD3-202ENST00000356800 SNAI1O95863 264 aaPredicted RBP20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 ACTR2P61160 394 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 AMPD3Q01432 767 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 CNNM4Q6P4Q7 775 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 CCDC62Q6P9F0 684 aa20.26■□□□□ 0.83
SMARCD3-202ENST00000356800 KCTD17Q8N5Z5 321 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms