RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ATP6V0A4Q9HBG4 840 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 EFCAB6Q5THR3 1501 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 MYO1FO00160 1098 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 H2AFZP0C0S5 128 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 UBXN2AP68543 259 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 DARS2Q6PI48 645 aaKnown RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 H2AFVQ71UI9 128 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 HEXIM2Q96MH2 286 aaKnown RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 FARP1Q9Y4F1 1045 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 COL3A1P02461 1466 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 NEMP1O14524 444 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 PDE1CQ14123 709 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 SLFN12LQ6IEE8 588 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 TTLL6Q8N841 843 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 CDC26Q8NHZ8 85 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF653Q96CK0 615 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 CBX8Q9HC52 389 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 HPCAL4Q9UM19 191 aa5.98□□□□□ -1.45
PTPRD-202ENST00000356435 NPHP4O75161 1426 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-202ENST00000356435 AFPP02771 609 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SRGAP2CP0DJJ0 459 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 IL9RQ01113 521 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 KRBA2Q6ZNG9 492 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SRPK1Q96SB4 655 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 MSTO1Q9BUK6 570 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 BMP3P12645 472 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 MAPK4P31152 587 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 ANGPTL8Q6UXH0 198 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 RABGGTAQ92696 567 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 AK8Q96MA6 479 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 MYCBPQ99417 103 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 MRPL47Q9HD33 250 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 A0A1W2PQ27 194 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 A0A1W2PQ64 194 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 A0A1W2PQD8 194 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 CCDC151A5D8V7 595 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 ECEL1O95672 775 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 COPB2P35606 906 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 PHKA2P46019 1235 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 APBA1Q02410 837 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 CYP4A11Q02928 519 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 BZW1Q7L1Q6 419 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 WHAMMQ8TF30 809 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SDR42E1Q8WUS8 393 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SLC7A5P2Q9GIP4 190 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 TOPORSQ9NS56 1045 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 USP17L3A6NCW0 530 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 USP17L4A6NCW7 530 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 BUB1O43683 1085 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 PFKFB2O60825 505 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 OR6B2Q6IFH4 312 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 PPP4R4Q6NUP7 873 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 CATSPER4Q7RTX7 472 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 USP17L1Q7RTZ2 530 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 C17orf53Q8N3J3 647 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 OR8K1Q8NGG5 319 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 CFAP61Q8NHU2 1237 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 DBNDD1Q9H9R9 158 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SLC39A2Q9NP94 309 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 HACD3Q9P035 362 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SPECC1L-ADORA2AF8WAN1 911 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 GOLGA8SH3BPF8 625 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 NR2F2P24468 414 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 VPS41P49754 854 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 RWDD4Q6NW29 188 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 FBXO38Q6PIJ6 1188 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 LRRC8AQ8IWT6 810 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 RAB42Q8N4Z0 105 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SNX19Q92543 992 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 DDX17Q92841 729 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 GDAP1L1Q96MZ0 367 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 EFHD1Q9BUP0 239 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 EFCAB14O75071 495 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 H2AFXP16104 143 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 UBE3CQ15386 1083 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SYMPKQ92797 1274 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 PIM2Q9P1W9 311 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 NEO1Q92859 1461 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 ELF2Q15723 593 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 CC2D1AQ6P1N0 951 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 TRIM67Q6ZTA4 783 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 TMTC3Q6ZXV5 915 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 RBM46Q8TBY0 533 aaKnown RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 VPS39Q96JC1 886 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 PPP1R16BQ96T49 567 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 FAM49AQ9H0Q0 323 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-202ENST00000356435 STK38LQ9Y2H1 464 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 ADGRB1O14514 1584 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 FAM170AA1A519 330 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 KCTD1Q719H9 257 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 LRRC43Q8N309 656 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SSH3Q8TE77 659 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 DEPDC1BQ8WUY9 529 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 NEUROG2Q9H2A3 272 aa5.97□□□□□ -1.45
PTPRD-202ENST00000356435 OPHN1O60890 802 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 MSH2P43246 934 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 LZICQ8WZA0 190 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms