RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 CCDC155Q8N6L0 562 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 LRRC1Q9BTT6 524 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 TMEM165Q9HC07 324 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 LRWD1Q9UFC0 647 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 FLT1P17948 1338 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 PDE2AO00408 941 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 EPHB6O15197 1021 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 RASSF9O75901 435 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SRGNP10124 158 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 FECHP22830 423 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 GNA11P29992 359 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 CYLC1P35663 651 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 GSTO1P78417 241 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 AMPD2Q01433 879 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 TRAPPC3LQ5T215 181 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 CCDC42Q96M95 316 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 DNAJC7Q99615 494 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 ZMYND12Q9H0C1 365 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 GGT7Q9UJ14 662 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 FAM184BQ9ULE4 1060 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 DNM1LO00429 736 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SLC37A4O43826 429 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 TMOD1P28289 359 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SLC16A2P36021 539 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 GRAPQ13588 217 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 CALCRLQ16602 461 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 MMTAG2Q9BU76 263 aaKnown RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 NOD2Q9HC29 1040 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 CD209Q9NNX6 404 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 MYMKA6NI61 221 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 TMCO5BA8MYB1 307 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SMIM24O75264 130 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 PPP1R37O75864 691 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SLC8A1P32418 973 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 RPS6KA3P51812 740 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 KRT83P78385 493 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 WLSQ5T9L3 541 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 TATDN2Q93075 761 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 DHTKD1Q96HY7 919 aaPredicted RBP10.28□□□□□ -0.76
SMG6-202ENST00000354901 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 ZHX3Q9H4I2 956 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 ATP6V0A4Q9HBG4 840 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 MYH10P35580 1976 aa10.28□□□□□ -0.76
SMG6-202ENST00000354901 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 BICDL2A1A5D9 508 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 SPA17Q15506 151 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.76
SMG6-202ENST00000354901 ZC3H12AQ5D1E8 599 aaKnown RBP10.27□□□□□ -0.76
SMG6-202ENST00000354901 KRT27Q7Z3Y8 459 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 CPLX4Q7Z7G2 160 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 EPN3Q9H201 632 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.76
SMG6-202ENST00000354901 A0A1W2PQC6 194 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 AKR1B10O60218 316 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 GTF2IP78347 998 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 CKAP4Q07065 602 aaKnown RBP10.27□□□□□ -0.77
SMG6-202ENST00000354901 KIF5AQ12840 1032 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 PTGISQ16647 500 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 RRAGAQ7L523 313 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 TRAPPC11Q7Z392 1133 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 SNX29Q8TEQ0 813 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 ITFG2Q969R8 447 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 CYFIP2Q96F07 1278 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 ZNF287Q9HBT7 754 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 MYO1AQ9UBC5 1043 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 STK38LQ9Y2H1 464 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 RGPD3A6NKT7 1758 aaPredicted RBP10.27□□□□□ -0.77
SMG6-202ENST00000354901 RGPD4Q7Z3J3 1758 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 ZSCAN5CA6NGD5 496 aaPredicted RBP10.27□□□□□ -0.77
SMG6-202ENST00000354901 AMPD3Q01432 767 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 ARID5AQ03989 594 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 HLTFQ14527 1009 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMG6-202ENST00000354901 MIIPQ5JXC2 388 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 DPP8Q6V1X1 898 aaPredicted RBP10.27□□□□□ -0.77
SMG6-202ENST00000354901 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
SMG6-202ENST00000354901 KCNK18Q7Z418 384 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 MXD3Q9BW11 206 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.77
SMG6-202ENST00000354901 FAM170AA1A519 330 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 GOLGA6L10A6NI86 522 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 ZNF263O14978 683 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 MOCS3O95396 460 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 ANP32DO95626 131 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 ZBED6P86452 979 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms