RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
DDX4-201ENST00000353507 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
DDX4-201ENST00000353507 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
DDX4-201ENST00000353507 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
DDX4-201ENST00000353507 MYO3BQ8WXR4 1341 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 RIMBP2O15034 1052 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 APBA1Q02410 837 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 PAK2Q13177 524 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 NNTQ13423 1086 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 SH3GL2Q99962 352 aa13.33□□□□□ -0.27
DDX4-201ENST00000353507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
DDX4-201ENST00000353507 GRID2IPA4D2P6 1211 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 SERPINB2P05120 415 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 CYP11B2P19099 503 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 NR2F2P24468 414 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 TAF4BQ92750 862 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 USP40Q9NVE5 1235 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 ADAMTS1Q9UHI8 967 aa13.33□□□□□ -0.28
DDX4-201ENST00000353507 A0A087X0T9 212 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 FAM228BP0C875 321 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 SHMT1P34896 483 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 KCTD10Q9H3F6 313 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 EPB41L5Q9HCM4 733 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 NFU1Q9UMS0 254 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PCDHGC5Q9Y5F6 944 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PCDHA2Q9Y5H9 948 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 STAT3P40763 770 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 IRAK1P51617 712 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 GNGT1P63211 74 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 EDRF1Q3B7T1 1238 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
DDX4-201ENST00000353507 KRT12Q99456 494 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 AIPL1Q9NZN9 384 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PACSIN2Q9UNF0 486 aaPredicted RBP13.32□□□□□ -0.28
DDX4-201ENST00000353507 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
DDX4-201ENST00000353507 ESYT3A0FGR9 886 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 SLC26A4O43511 780 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 GLI1P08151 1106 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
DDX4-201ENST00000353507 ADRA2BP18089 450 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 MAGEA9P43362 315 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 TNNC1P63316 161 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 QRICH1Q2TAL8 776 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 CFAP58Q5T655 872 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 ERMNQ8TAM6 284 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 CCDC43Q96MW1 224 aaKnown RBP13.32□□□□□ -0.28
DDX4-201ENST00000353507 ZIM3Q96PE6 472 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PACSIN1Q9BY11 444 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 GANQ9H2C0 597 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PCDHA1Q9Y5I3 950 aa13.32□□□□□ -0.28
DDX4-201ENST00000353507 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 MED24O75448 989 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 CARSP49589 748 aaKnown RBP13.31□□□□□ -0.28
DDX4-201ENST00000353507 USP11P51784 963 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 CORO7P57737 925 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
DDX4-201ENST00000353507 FAM107BQ9H098 131 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
DDX4-201ENST00000353507 KCNMB3Q9NPA1 279 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 GDF3Q9NR23 364 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 ARMCX3Q9UH62 379 aaPredicted RBP13.31□□□□□ -0.28
DDX4-201ENST00000353507 SUGT1Q9Y2Z0 365 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 ANKRD65E5RJM6 399 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 CCT5P48643 541 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 TTMPQ5BVD1 217 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 BCAS4Q8TDM0 211 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 ARL8AQ96BM9 186 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
DDX4-201ENST00000353507 ZSCAN5CA6NGD5 496 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 EBAG9O00559 213 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 EIF3HO15372 352 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX4-201ENST00000353507 SCNN1DP51172 638 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 SLC12A3P55017 1021 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 IFI16Q16666 785 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms