RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CPP00450 1065 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 FAM153BP0C7A2 387 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 ASIC2Q16515 512 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 FAM153CQ494X1 144 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 CRY2Q49AN0 593 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 TTBK2Q6IQ55 1244 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 GPBP1Q86WP2 473 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 CERKQ8TCT0 537 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 NAP1L4Q99733 375 aaKnown RBP26.97■■□□□ 1.91
CPNE1-202ENST00000352393 PACSIN1Q9BY11 444 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 KANSL2Q9H9L4 492 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 EPB41L5Q9HCM4 733 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 FAM153AQ9UHL3 310 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 KIAA1024Q9UPX6 916 aa26.97■■□□□ 1.91
CPNE1-202ENST00000352393 BTNL10A8MVZ5 291 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 MARCH6O60337 910 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 CYP11B2P19099 503 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 GUCY2DQ02846 1103 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 KLHL30Q0D2K2 578 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 EDRF1Q3B7T1 1238 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 TTC31Q49AM3 519 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-202ENST00000352393 PACS2Q86VP3 889 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 FAM133AQ8N9E0 248 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 MYO3BQ8WXR4 1341 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 NPHP3-ACAD11A0A0J9YXS1 232 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 POTEB3A0JP26 581 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 POTECB2RU33 542 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 ZBTB5O15062 677 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 PICALMQ13492 652 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 VPS72Q15906 364 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 KIAA0753Q2KHM9 967 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 POTEBQ6S5H4 581 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 PPP4R3CPQ6ZMV5 832 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 BCAS4Q8TDM0 211 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 CCDC43Q96MW1 224 aaKnown RBP26.96■■□□□ 1.91
CPNE1-202ENST00000352393 EFCC1Q9HA90 598 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 SWAP70Q9UH65 585 aa26.96■■□□□ 1.91
CPNE1-202ENST00000352393 ESYT3A0FGR9 886 aa26.95■■□□□ 1.91
CPNE1-202ENST00000352393 NOP2P46087 812 aaKnown RBP26.95■■□□□ 1.91
CPNE1-202ENST00000352393 CASKIN2Q8WXE0 1202 aa26.95■■□□□ 1.91
CPNE1-202ENST00000352393 PSTPIP2Q9H939 334 aa26.95■■□□□ 1.91
CPNE1-202ENST00000352393 EMILIN3Q9NT22 766 aa26.95■■□□□ 1.91
CPNE1-202ENST00000352393 LRRC37AA6NMS7 1700 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 A6NNZ2 444 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 MYBP10242 640 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 DNA2P51530 1060 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 CACNB1Q02641 598 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-202ENST00000352393 TUBB8Q3ZCM7 444 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 HERC4Q5GLZ8 1057 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-202ENST00000352393 DPY19L2P1Q6NXN4 242 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 CD302Q8IX05 232 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 KRT12Q99456 494 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.95■■□□□ 1.9
CPNE1-202ENST00000352393 KCNMB3Q9NPA1 279 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 ADAMTS1Q9UHI8 967 aa26.95■■□□□ 1.9
CPNE1-202ENST00000352393 PACSIN2Q9UNF0 486 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-202ENST00000352393 A0A087WUV0 522 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-202ENST00000352393 USP17L10C9JJH3 530 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 EBAG9O00559 213 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 CES2O00748 559 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 ARID5AQ03989 594 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 TRAPPC3LQ5T215 181 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 GPATCH4Q5T3I0 446 aaKnown RBP26.94■■□□□ 1.9
CPNE1-202ENST00000352393 CFAP58Q5T655 872 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 TADA2BQ86TJ2 420 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 PIK3R5Q8WYR1 880 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 TMEM59LQ9UK28 342 aa26.94■■□□□ 1.9
CPNE1-202ENST00000352393 SHTN1A0MZ66 631 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 ZNF233A6NK53 670 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 ADAM9Q13443 819 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 CDC37Q16543 378 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-202ENST00000352393 USP38Q8NB14 1042 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 DDX4Q9NQI0 724 aaKnown RBP26.93■■□□□ 1.9
CPNE1-202ENST00000352393 POLLQ9UGP5 575 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 PITPNM2Q9BZ72 1349 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 KRT14P02533 472 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 SLC16A2P36021 539 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 KCNH2Q12809 1159 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 SKIDA1Q1XH10 827 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 TBC1D16Q8TBP0 767 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 WHAMMQ8TF30 809 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 IFT81Q8WYA0 676 aa26.93■■□□□ 1.9
CPNE1-202ENST00000352393 SLC12A3P55017 1021 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 ARSHQ5FYA8 562 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 KDM7AQ6ZMT4 941 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 SH2D3CQ8N5H7 860 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 CETN3O15182 167 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 SHMT1P34896 483 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 EPS15P42566 896 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 TNNC1P63316 161 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 C10orf76Q5T2E6 689 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 TTC19Q6DKK2 380 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-202ENST00000352393 MBOAT7Q96N66 472 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 PLCB1Q9NQ66 1216 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 SERPINB13Q9UIV8 391 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 FAM169AQ9Y6X4 670 aa26.92■■□□□ 1.9
CPNE1-202ENST00000352393 MED24O75448 989 aa26.91■■□□□ 1.9
CPNE1-202ENST00000352393 PDCLQ13371 301 aa26.91■■□□□ 1.9
CPNE1-202ENST00000352393 EMC10Q5UCC4 262 aa26.91■■□□□ 1.9
CPNE1-202ENST00000352393 DHX36Q9H2U1 1008 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms