RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 EPHB4P54760 987 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 OSTNP61366 133 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 CCDC197Q8NCU1 140 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 DBNLQ9UJU6 430 aaKnown RBP24.93■■□□□ 1.58
NPAS3-201ENST00000346562 GFPT2O94808 682 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 RBL2Q08999 1139 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 ERVV-1B6SEH8 477 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 PRPF3O43395 683 aaKnown RBP24.93■■□□□ 1.58
NPAS3-201ENST00000346562 MT-ND3P03897 115 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 EEPD1Q7L9B9 569 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 CFAP36Q96G28 342 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 PNMA6FA0A0J9YX94 578 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 DDIT3P35638 169 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 FAM133AQ8N9E0 248 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 COA7Q96BR5 231 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 EMILIN3Q9NT22 766 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 CD58P19256 250 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 JAK3P52333 1124 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 MICAL1Q8TDZ2 1067 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 PMLP29590 882 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 NT5C2P49902 561 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 KSR1Q8IVT5 923 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 ZBED2Q9BTP6 218 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 PLA2G4BP0C869 781 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 GRAPQ13588 217 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 LCORLQ8N3X6 602 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 GRAPLQ8TC17 118 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-201ENST00000346562 BCAS4Q8TDM0 211 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 PPP1R16BQ96T49 567 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 SEC31BQ9NQW1 1179 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 LDHAP00338 332 aaKnown RBP24.92■■□□□ 1.58
NPAS3-201ENST00000346562 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
NPAS3-201ENST00000346562 IKBKBO14920 756 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 WHAMMQ8TF30 809 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 STAP2Q9UGK3 403 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 CDC23Q9UJX2 597 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 COBLO75128 1261 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 GIMAP8Q8ND71 665 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 DONSONQ9NYP3 566 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 SUCLA2Q9P2R7 463 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 SERPING1P05155 500 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 HSP90AA5PQ58FG0 334 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 RNF219Q5W0B1 726 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 PPWD1Q96BP3 646 aaKnown RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 SH2B2O14492 632 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 PPP1R13BQ96KQ4 1090 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 TUBB6Q9BUF5 446 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 FNDC3AQ9Y2H6 1198 aaKnown RBP24.91■■□□□ 1.58
NPAS3-201ENST00000346562 PCDHA5Q9Y5H7 936 aa24.91■■□□□ 1.58
NPAS3-201ENST00000346562 MX2P20592 715 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 SLMAPQ14BN4 828 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 PPP4R3CPQ6ZMV5 832 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 FOXP4Q8IVH2 680 aaPredicted RBP24.9■■□□□ 1.58
NPAS3-201ENST00000346562 ABCF3Q9NUQ8 709 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 RNF14Q9UBS8 474 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 SCINQ9Y6U3 715 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 PAMP19021 973 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 HP1BP3Q5SSJ5 553 aaPredicted RBP24.9■■□□□ 1.58
NPAS3-201ENST00000346562 SCARA5Q6ZMJ2 495 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 PCGF5Q86SE9 256 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 COA1Q9GZY4 146 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 MRPL46Q9H2W6 279 aaKnown RBP24.9■■□□□ 1.58
NPAS3-201ENST00000346562 FIS1Q9Y3D6 152 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 MKRN3Q13064 507 aaKnown RBP24.9■■□□□ 1.58
NPAS3-201ENST00000346562 SLC35F6Q8N357 371 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 ZNF526Q8TF50 670 aaPredicted RBP24.9■■□□□ 1.58
NPAS3-201ENST00000346562 TNFAIP2Q03169 654 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 FBXL13Q8NEE6 735 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 DCAF4Q8WV16 495 aa24.9■■□□□ 1.58
NPAS3-201ENST00000346562 TOM1L1O75674 476 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 SRGAP2CP0DJJ0 459 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 BCL2L12Q9HB09 334 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 LRRD1A4D1F6 860 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 RNF207Q6ZRF8 634 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 MIGA2Q7L4E1 593 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 FAM167AQ96KS9 214 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 LCMT1Q9UIC8 334 aa24.89■■□□□ 1.58
NPAS3-201ENST00000346562 SLFN14P0C7P3 912 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 SNCBQ16143 134 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 NEO1Q92859 1461 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 PLTPP55058 493 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 CYP4F22Q6NT55 531 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 RNF217Q8TC41 542 aa24.89■■□□□ 1.57
NPAS3-201ENST00000346562 ZBED1O96006 694 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 UBE2SQ16763 222 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 C2orf69Q8N8R5 385 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 MAN1B1Q9UKM7 699 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 TLR7Q9NYK1 1049 aaKnown RBP24.88■■□□□ 1.57
NPAS3-201ENST00000346562 FAF1Q9UNN5 650 aaPredicted RBP24.88■■□□□ 1.57
NPAS3-201ENST00000346562 RABGGTAQ92696 567 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 AATKQ6ZMQ8 1374 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 TRIM67Q6ZTA4 783 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 CLTAP09496 248 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 ATXN8OSP0DMR3 200 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 TAC1P20366 129 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 NSUN7Q8NE18 718 aaKnown RBP24.88■■□□□ 1.57
NPAS3-201ENST00000346562 NLRP4Q96MN2 994 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 MMTAG2Q9BU76 263 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms