RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 ICAM3P32942 547 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 SLC26A2P50443 739 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 ADALQ6DHV7 355 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 C7orf31Q8N865 590 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 SLC7A3Q8WY07 619 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 DHX58Q96C10 678 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.12□□□□□ -0.955e-7■■■■□ 19.8
HMGCR-202ENST00000343975 DDX19AQ9NUU7 478 aaKnown RBP9.12□□□□□ -0.95
HMGCR-202ENST00000343975 ERAP1Q9NZ08 941 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 PRKAG2Q9UGJ0 569 aa9.12□□□□□ -0.95
HMGCR-202ENST00000343975 SLC26A4O43511 780 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 UBA1P22314 1058 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 ACTR2P61160 394 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 STIM1Q13586 685 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 SWSAP1Q6NVH7 229 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 SH3TC2Q8TF17 1288 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 GABBR1Q9UBS5 961 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 DDX20Q9UHI6 824 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 NFASCO94856 1347 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 OTOFQ9HC10 1997 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 GREB1LQ9C091 1923 aaPredicted RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 FAM86B1E9PN63 330 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 OPLAHO14841 1288 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 FAM86B2P0C5J1 330 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 NCBP1Q09161 790 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 FSCN1Q16658 493 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 LY6KQ17RY6 165 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 AFG1LQ8WV93 481 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 TRIB2Q92519 343 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 IFT74Q96LB3 600 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 KCNH3Q9ULD8 1083 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 MYH6P13533 1939 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 SLC37A4O43826 429 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 FAM13AO94988 1023 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 CAPN2P17655 700 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 ITGB5P18084 799 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 MCM4P33991 863 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 POLGP54098 1239 aaPredicted RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 TBC1D8BQ0IIM8 1120 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 CELF3Q5SZQ8 465 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 KCTD17Q8N5Z5 321 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 DEFB118Q96PH6 123 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 MTG1Q9BT17 334 aaPredicted RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 CUEDC2Q9H467 287 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 TUFT1Q9NNX1 390 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
HMGCR-202ENST00000343975 GJD2Q9UKL4 321 aa9.11□□□□□ -0.95
HMGCR-202ENST00000343975 CTAGE5O15320 804 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 MARK3P27448 753 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■□□□□ 9.5
HMGCR-202ENST00000343975 MRPS9P82933 396 aaKnown RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 XKR3Q5GH77 459 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 SASS6Q6UVJ0 657 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 SLC5A5Q92911 643 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CEP170P1Q96L14 293 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 PLIN2Q99541 437 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 GTPBP4Q9BZE4 634 aaKnown RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CSRNP2Q9H175 543 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 NUP62CLQ9H1M0 184 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 MAGEF1Q9HAY2 307 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 POTEMA6NI47 508 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CMA1P23946 247 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 EDNRBP24530 442 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 TCF7P36402 384 aaPredicted RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 IGBP1P78318 339 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 METTL13Q8N6R0 699 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CYP2W1Q8TAV3 490 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 TNMDQ9H2S6 317 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 Q9Y3F1 56 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 A0A1W2PQ27 194 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 A0A1W2PQ64 194 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 SUPT20HL2P0C7V6 817 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 ASIC1P78348 528 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CACNB2Q08289 660 aaPredicted RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 TPD52L1Q16890 204 aaPredicted RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 CCDC65Q8IXS2 484 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 EIF2AK1Q9BQI3 630 aaKnown RBP9.1□□□□□ -0.95
HMGCR-202ENST00000343975 STARD7Q9NQZ5 370 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 PCDHA7Q9UN72 937 aa9.1□□□□□ -0.95
HMGCR-202ENST00000343975 RRN3P2A6NIE6 340 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 HBP1O60381 514 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 LETM1O95202 739 aaPredicted RBP9.09□□□□□ -0.95
HMGCR-202ENST00000343975 SMTNP53814 917 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 TPM4P67936 248 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 MTERF2Q49AM1 385 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 SPECC1Q5M775 1068 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 DYDC2Q96IM9 177 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 LXNQ9BS40 222 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 FTOQ9C0B1 505 aaKnown RBP eCLIP9.09□□□□□ -0.95
HMGCR-202ENST00000343975 TMEM60Q9H2L4 133 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 PDGFCQ9NRA1 345 aa9.09□□□□□ -0.95
HMGCR-202ENST00000343975 RMND1Q9NWS8 449 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms