RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 DUX4L7P0CJ90 424 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 DR1Q01658 176 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 HP1BP3Q5SSJ5 553 aaPredicted RBP18.95■□□□□ 0.62
SYDE2-202ENST00000341460 DLGAP2Q9P1A6 1054 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 DUX4Q9UBX2 424 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 ARMCX3Q9UH62 379 aaPredicted RBP18.95■□□□□ 0.62
SYDE2-202ENST00000341460 PTPRTO14522 1441 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 NVLO15381 856 aaKnown RBP18.95■□□□□ 0.62
SYDE2-202ENST00000341460 APBA3O96018 575 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 CATSPER1Q8NEC5 780 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 EDC3Q96F86 508 aaKnown RBP18.95■□□□□ 0.62
SYDE2-202ENST00000341460 SH3GL1Q99961 368 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 PSTPIP2Q9H939 334 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 IQCA1LA6NCM1 817 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 ZNF473Q8WTR7 871 aaKnown RBP18.95■□□□□ 0.62
SYDE2-202ENST00000341460 COG1Q8WTW3 980 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 GID8Q9NWU2 228 aa18.95■□□□□ 0.62
SYDE2-202ENST00000341460 TRAF7Q6Q0C0 670 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 FANCBQ8NB91 859 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 COQ7Q99807 217 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 TPP2P29144 1249 aaPredicted RBP18.94■□□□□ 0.62
SYDE2-202ENST00000341460 SGO2Q562F6 1265 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.94■□□□□ 0.62
SYDE2-202ENST00000341460 ZMYM6O95789 1325 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 PDE6AP16499 860 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 ECE1P42892 770 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 BZW1Q7L1Q6 419 aaKnown RBP18.94■□□□□ 0.62
SYDE2-202ENST00000341460 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.94■□□□□ 0.62
SYDE2-202ENST00000341460 GALNT17Q6IS24 598 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 SLFN12Q8IYM2 578 aa18.94■□□□□ 0.62
SYDE2-202ENST00000341460 SMCR8Q8TEV9 937 aaPredicted RBP18.94■□□□□ 0.62
SYDE2-202ENST00000341460 CCDC188H7C350 402 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 RPN1P04843 607 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 MAP4P27816 1152 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 RDH13Q8NBN7 331 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 TMEM51Q9NW97 253 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 RTEL1Q9NZ71 1219 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 TMCC1O94876 653 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 PCCAP05165 728 aaPredicted RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ARID5BQ14865 1188 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 TAB3Q8N5C8 712 aaPredicted RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 GRAMD1AQ96CP6 724 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 MRPL40Q9NQ50 206 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 PDP2Q9P2J9 529 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 CHMP2BQ9UQN3 213 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 MRPL11Q9Y3B7 192 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 CSADQ9Y600 493 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 A0A0D9SFI3 127 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 SAT1P21673 171 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ARHGEF16Q5VV41 709 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 PDXDC1Q6P996 788 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 DDX17Q92841 729 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ARHGAP26Q9UNA1 814 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ARIH1Q9Y4X5 557 aaPredicted RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 RNF103-CHMP3A0A140T963 221 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 HNRNPCL1O60812 293 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 SERPINB1P30740 379 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 FLAD1Q8NFF5 587 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ZC3H15Q8WU90 426 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 SLC40A1Q9NP59 571 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 NBPF26B4DH59 902 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 TRIM16O95361 564 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ACTN1P12814 892 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 GYG1P46976 350 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 PAPOLAP51003 745 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 PTPN21Q16825 1174 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 NBPF15Q8N660 670 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 CNOT6LQ96LI5 555 aaKnown RBP18.93■□□□□ 0.62
SYDE2-202ENST00000341460 CD248Q9HCU0 757 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ETAA1Q9NY74 926 aa18.93■□□□□ 0.62
SYDE2-202ENST00000341460 ADGRL2O95490 1459 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 BLMP54132 1417 aaPredicted RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 HSPD1P10809 573 aaKnown RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 KRT81Q14533 505 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 FAM102BQ5T8I3 360 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 PNMA1Q8ND90 353 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 GIPC2Q8TF65 315 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 EAF2Q96CJ1 260 aaPredicted RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 CCDC90BQ9GZT6 254 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 PCDHA12Q9UN75 941 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 EPHB1P54762 984 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 MESDQ14696 234 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 FSCBQ5H9T9 825 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 TESPA1A2RU30 521 aaPredicted RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 POLR2MP0CAP2 368 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 TECP42680 631 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 GUCY1A3Q02108 690 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 IL17REQ8NFR9 667 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 NHEJ1Q9H9Q4 299 aaPredicted RBP18.92■□□□□ 0.62
SYDE2-202ENST00000341460 MLXIPQ9HAP2 919 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 STMN3Q9NZ72 180 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 SLC26A7Q8TE54 656 aa18.92■□□□□ 0.62
SYDE2-202ENST00000341460 FAM96AQ9H5X1 160 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms