RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 KIF18AQ8NI77 898 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 PIN4Q9Y237 131 aaKnown RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 MYPNQ86TC9 1320 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 PGK2P07205 417 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 VCAM1P19320 739 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 DDIT3P35638 169 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 CEP55Q53EZ4 464 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 FAM204AQ9H8W3 233 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 PSMC2P35998 433 aaKnown RBP14.03□□□□□ -0.16
LIN54-201ENST00000340417 MYL7Q01449 175 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 VGLL4Q14135 290 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 TRIM14Q14142 442 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 TAF1DQ9H5J8 278 aaPredicted RBP14.03□□□□□ -0.16
LIN54-201ENST00000340417 GNG11P61952 73 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 PPIL2Q13356 520 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 IGSF22Q8N9C0 903 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 UBXN4Q92575 508 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 FBXO28Q9NVF7 368 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 POTEB3A0JP26 581 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 CYP2C8P10632 490 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 CMA1P23946 247 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 PDE6CP51160 858 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 POTEBQ6S5H4 581 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 PGBD4Q96DM1 585 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 NT5C1BQ96P26 610 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 MYO1AQ9UBC5 1043 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 AK9Q5TCS8 1911 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 CLIC2O15247 247 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 RPS6KA5O75582 802 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 CDC25AP30304 524 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 TSPY1Q01534 308 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 POLR3FQ9H1D9 316 aaPredicted RBP14.03□□□□□ -0.16
LIN54-201ENST00000340417 SLC12A6Q9UHW9 1150 aa14.03□□□□□ -0.16
LIN54-201ENST00000340417 STAM2O75886 525 aa14.02□□□□□ -0.16
LIN54-201ENST00000340417 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.16
LIN54-201ENST00000340417 PDHBP11177 359 aa14.02□□□□□ -0.16
LIN54-201ENST00000340417 BEST2Q8NFU1 509 aa14.02□□□□□ -0.16
LIN54-201ENST00000340417 RNASE9P60153 205 aaKnown RBP14.02□□□□□ -0.16
LIN54-201ENST00000340417 KLHL30Q0D2K2 578 aa14.02□□□□□ -0.16
LIN54-201ENST00000340417 ARMCX2Q7L311 632 aa14.02□□□□□ -0.16
LIN54-201ENST00000340417 MYZAPP0CAP1 466 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 BFSP2Q13515 415 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 LRRC41Q15345 812 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 CYP4F22Q6NT55 531 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 NFE2L3Q9Y4A8 694 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 FAM169AQ9Y6X4 670 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 CAPNS2Q96L46 248 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 LRRC4Q9HBW1 653 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 C17orf102A2RUQ5 167 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 SFI1A8K8P3 1242 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 NR2F2P24468 414 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 STAT1P42224 750 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 USP11P51784 963 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 SFMBT2Q5VUG0 894 aa14.02□□□□□ -0.17
LIN54-201ENST00000340417 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 CCDC175P0C221 793 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 RAG1P15918 1043 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 TRIM50Q86XT4 487 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 DYDC1Q8WWB3 177 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 FAM149B1Q96BN6 582 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 FAM207AQ9NSI2 230 aaPredicted RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 TSKSQ9UJT2 592 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 MTMR6Q9Y217 621 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 PLCG1P19174 1290 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 XPAP23025 273 aaPredicted RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 FAM186BQ8IYM0 893 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 LXNQ9BS40 222 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 EHD4Q9H223 541 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 TXNDC16Q9P2K2 825 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 CYP2C9P11712 490 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 MCM3P25205 808 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 YAF2Q8IY57 180 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 OR6B3Q8NGW1 331 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 MAP3K20Q9NYL2 800 aaKnown RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 SUCLA2Q9P2R7 463 aaPredicted RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 FAM170AA1A519 330 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 PPP6R2O75170 966 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 ICAM1P05362 532 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 PCDHA7Q9UN72 937 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 PCDHB7Q9Y5E2 793 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 PCDHB6Q9Y5E3 794 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 SRGAP2BP0DMP2 458 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 FGFR2P21802 821 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
LIN54-201ENST00000340417 RNF139Q8WU17 664 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
LIN54-201ENST00000340417 GUCA1BQ9UMX6 200 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms