RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 IFFO1Q0D2I5 559 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
SCARB1-202ENST00000339570 GBP6Q6ZN66 633 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 TRIM51Q9BSJ1 452 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 PPP1R37O75864 691 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 ZNF211Q13398 564 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-202ENST00000339570 PLS1Q14651 629 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
SCARB1-202ENST00000339570 CCDC114Q96M63 670 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 RAB34Q9BZG1 259 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-202ENST00000339570 MYZAPP0CAP1 466 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 IKQ13123 557 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-202ENST00000339570 DAAM2Q86T65 1068 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 ATP8A1Q9Y2Q0 1164 aa17.69■□□□□ 0.42
SCARB1-202ENST00000339570 FRMD3A2A2Y4 597 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 TTI1O43156 1089 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 HSD17B3P37058 310 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 TNNC1P63316 161 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-202ENST00000339570 E2F5Q15329 346 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 KRT71Q3SY84 523 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 FIGNQ5HY92 759 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 AMIGO3Q86WK7 504 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 IQCKQ8N0W5 287 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 ATP6V1G3Q96LB4 118 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 LUC7LQ9NQ29 371 aaKnown RBP17.68■□□□□ 0.42
SCARB1-202ENST00000339570 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
SCARB1-202ENST00000339570 ITGB4P16144 1822 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 MYCBPAPQ8TBZ2 947 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 CEP72Q9P209 647 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 GGT7Q9UJ14 662 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
SCARB1-202ENST00000339570 USP17L10C9JJH3 530 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 UFL1O94874 794 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 AKR1B1P15121 316 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 NAB2Q15742 525 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 PTGISQ16647 500 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 QPCTQ16769 361 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 B4GALNT4Q76KP1 1039 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 ZNF571Q7Z3V5 609 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 PEX26Q7Z412 305 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 SART1O43290 800 aaKnown RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 GFPT2O94808 682 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 MDH1P40925 334 aaKnown RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 PSMC6P62333 389 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 CDK17Q00537 523 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 LRRC63Q05C16 580 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 KCNA1Q09470 495 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 SLC18A3Q16572 532 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 SPRED3Q2MJR0 410 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 ASTE1Q2TB18 679 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 TBC1D10BQ4KMP7 808 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-202ENST00000339570 MFSD14BQ5SR56 506 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 SELENOSQ9BQE4 189 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 EPN3Q9H201 632 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 PLA2G4BP0C869 781 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 USH1GQ495M9 461 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 DAGLBQ8NCG7 672 aa17.67■□□□□ 0.42
SCARB1-202ENST00000339570 RSPH10B2B2RC85 870 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 RSPH10BP0C881 870 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 SCNN1DP51172 638 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 MAGOHP61326 146 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 GALNT17Q6IS24 598 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 MAGOHBQ96A72 148 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 ANKRD2Q9GZV1 360 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 HNRNPH3P31942 346 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 SLCO1A2P46721 670 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 CASP4P49662 377 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 DHX9Q08211 1270 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 ALKBH5Q6P6C2 394 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 TPTE2Q6XPS3 522 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 CCDC121Q6ZUS5 278 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 KIRREL3Q8IZU9 778 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 CAVIN3Q969G5 261 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 MAGEF1Q9HAY2 307 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 GDF3Q9NR23 364 aa17.66■□□□□ 0.42
SCARB1-202ENST00000339570 NOC2LQ9Y3T9 749 aaKnown RBP17.66■□□□□ 0.42
SCARB1-202ENST00000339570 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 PDHBP11177 359 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 CACNB3P54284 484 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 CABS1Q96KC9 395 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms