RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 NEFHP12036 1026 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 GMPSP49915 693 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-202ENST00000339438 INHBCP55103 352 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 PPARAQ07869 468 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 HSP90AB4PQ58FF6 505 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 TNNI3KQ59H18 835 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 FOXB2Q5VYV0 432 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 NUGGCQ68CJ6 796 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 SLC30A9Q6PML9 568 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 NFXL1Q6ZNB6 911 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 CNGA4Q8IV77 575 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 CPLX3Q8WVH0 158 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 ALS2CR12Q96Q35 445 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 DNAJC7Q99615 494 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 YIPF3Q9GZM5 350 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 OCEL1Q9H607 264 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 ADARB2Q9NS39 739 aaKnown RBP6.17□□□□□ -1.42
CSDE1-202ENST00000339438 RGL1Q9NZL6 768 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 AGAP1Q9UPQ3 857 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 FPGT-TNNI3KV9GXZ4 949 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 GMNCA6NCL1 334 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 SPDYE5A6NIY4 337 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 PPP1R3GB7ZBB8 358 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 FERP16591 822 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 DRD4P21917 467 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 TIMM10P62072 90 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 MRPS25P82663 173 aaKnown RBP6.17□□□□□ -1.42
CSDE1-202ENST00000339438 SLC7A5Q01650 507 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 LBX2Q6XYB7 198 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 RASAL3Q86YV0 1011 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 PHC3Q8NDX5 983 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 RBM41Q96IZ5 413 aaKnown RBP6.17□□□□□ -1.42
CSDE1-202ENST00000339438 CAPZA3Q96KX2 299 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 TMBIM4Q9HC24 238 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 PIH1D3Q9NQM4 214 aaKnown RBP6.17□□□□□ -1.42
CSDE1-202ENST00000339438 WDR35Q9P2L0 1181 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 BPTFQ12830 3046 aa6.17□□□□□ -1.42
CSDE1-202ENST00000339438 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 POTEFA5A3E0 1075 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ZNF263O14978 683 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CDR1P51861 262 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 POSTNQ15063 836 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CDC37Q16543 378 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CCDC57Q2TAC2 916 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SH3D19Q5HYK7 790 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SPECC1Q5M775 1068 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ANO7Q6IWH7 933 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CYP26C1Q6V0L0 522 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SYNE3Q6ZMZ3 975 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 KIAA1328Q86T90 577 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GRAMD1CQ8IYS0 662 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SPATA4Q8NEY3 305 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 MKL1Q969V6 931 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 KLRG1Q96E93 195 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ZCWPW1Q9H0M4 648 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 HAUS4Q9H6D7 363 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CHCHD3Q9NX63 227 aaKnown RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GUCA1BQ9UMX6 200 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 E7EVH7 732 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SMAPO00193 183 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ECEL1O95672 775 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GLI1P08151 1106 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GNAT1P11488 350 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ZBED6P86452 979 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 TFCP2Q12800 502 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 MEA1Q16626 185 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CCDC96Q2M329 555 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 KIAA1755Q5JYT7 1200 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SH3RF1Q7Z6J0 888 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 FAM83AQ86UY5 434 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 TRIML1Q8N9V2 468 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 B4GALNT2Q8NHY0 566 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 FAM81AQ8TBF8 368 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 HVCN1Q96D96 273 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 PRMT6Q96LA8 375 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 ZNF317Q96PQ6 595 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 HAUS7Q99871 368 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GORASP1Q9BQQ3 440 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 TTYH3Q9C0H2 523 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 MYOZ2Q9NPC6 264 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 LIMA1Q9UHB6 759 aaKnown RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SNCAIPQ9Y6H5 919 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 A0A087X0B3 334 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 E7EWF7 191 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 IFIT3O14879 490 aaKnown RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 MYBP10242 640 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 PRLRP16471 622 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GNAZP19086 355 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 PHKA1P46020 1223 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 CD151P48509 253 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 GNAQP50148 359 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 TOB1P50616 345 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-202ENST00000339438 SLMAPQ14BN4 828 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 TRADDQ15628 312 aa6.16□□□□□ -1.42
CSDE1-202ENST00000339438 UAP1Q16222 522 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms