RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 RBM12BQ8IXT5 1001 aaKnown RBP4.37□□□□□ -1.71
XRCC4-202ENST00000338635 IFNL2Q8IZJ0 200 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 STPG3Q8N7X2 389 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 PIP4K2CQ8TBX8 421 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 CHFRQ96EP1 664 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 NPFFR2Q9Y5X5 522 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 ZNF202O95125 648 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 ENO2P09104 434 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 SMN1Q16637 294 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 SKIDA1Q1XH10 827 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 EDAQ92838 391 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 NEIL1Q96FI4 390 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 C1orf159Q96HA4 380 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 ARHGAP20Q9P2F6 1191 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 PTPN22Q9Y2R2 807 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 WDR33Q9C0J8 1336 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 NARSO43776 548 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 SUSD5O60279 629 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 FAHP16930 419 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 COMTP21964 271 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 VAMP1P23763 118 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 DGCR2P98153 550 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 PFKPQ01813 784 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 TUSC3Q13454 348 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 USP10Q14694 798 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 LSM12Q3MHD2 195 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 PAN2Q504Q3 1202 aaKnown RBP4.36□□□□□ -1.71
XRCC4-202ENST00000338635 SLC35F1Q5T1Q4 408 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 FUKQ8N0W3 1084 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 CEP89Q96ST8 783 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 KATNBL1Q9H079 304 aa4.36□□□□□ -1.71
XRCC4-202ENST00000338635 B2RBV5 119 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 H0Y858 1186 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 SMAD7O15105 426 aaKnown RBP4.35□□□□□ -1.71
XRCC4-202ENST00000338635 LTFP02788 710 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 INHBEP58166 350 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 HDLBPQ00341 1268 aaKnown RBP4.35□□□□□ -1.71
XRCC4-202ENST00000338635 PURAQ00577 322 aaKnown RBP4.35□□□□□ -1.71
XRCC4-202ENST00000338635 LARP1BQ659C4 914 aaKnown RBP4.35□□□□□ -1.71
XRCC4-202ENST00000338635 Q6ZSN1 163 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 REXO1L1PQ8IX06 675 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 IKZF4Q9H2S9 585 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 KCND1Q9NSA2 647 aa4.35□□□□□ -1.71
XRCC4-202ENST00000338635 PPARGC1AQ9UBK2 798 aaKnown RBP4.35□□□□□ -1.71
XRCC4-202ENST00000338635 MSCO60682 206 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 DDAH1O94760 285 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 IL18BPO95998 194 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 CAPNS1P04632 268 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 ZNF888P0CJ79 500 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-202ENST00000338635 COL6A2P12110 1019 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 ACO1P21399 889 aaKnown RBP4.34□□□□□ -1.71
XRCC4-202ENST00000338635 MCM7P33993 719 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 GRIA2P42262 883 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 ATXN1P54253 815 aaKnown RBP4.34□□□□□ -1.71
XRCC4-202ENST00000338635 RAC3P60763 192 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 PTH1RQ03431 593 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 DPTQ07507 201 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 ZNF568Q3ZCX4 644 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 OTOP3Q7RTS5 596 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 CARD11Q9BXL7 1154 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 GPR27Q9NS67 375 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 ACTR10Q9NZ32 417 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 INPP5FQ9Y2H2 1132 aa4.34□□□□□ -1.71
XRCC4-202ENST00000338635 RAD17O75943 681 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 CD276Q5ZPR3 534 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 C1orf210Q8IVY1 113 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 TACO1Q9BSH4 297 aaKnown RBP4.33□□□□□ -1.72
XRCC4-202ENST00000338635 PDGFDQ9GZP0 370 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-202ENST00000338635 NUB1Q9Y5A7 615 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 MRVI1Q9Y6F6 885 aa4.33□□□□□ -1.72
XRCC4-202ENST00000338635 CR2P20023 1033 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 MAP4K2Q12851 820 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 NOLC1Q14978 699 aaKnown RBP eCLIP4.32□□□□□ -1.72
XRCC4-202ENST00000338635 UHMK1Q8TAS1 419 aaKnown RBP4.32□□□□□ -1.72
XRCC4-202ENST00000338635 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 PHF20Q9BVI0 1012 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 ACBD3Q9H3P7 528 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 TELO2Q9Y4R8 837 aa4.32□□□□□ -1.72
XRCC4-202ENST00000338635 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 NKRFO15226 690 aaKnown RBP eCLIP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 C1SP09871 688 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 ATF4P18848 351 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 PPP2R2AP63151 447 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 SPIRE1Q08AE8 756 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 RNF151Q2KHN1 245 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 MRM1Q6IN84 353 aaKnown RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 USP53Q70EK8 1073 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 MICAL1Q8TDZ2 1067 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 PLEKHG4BQ96PX9 1271 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 ESYT3A0FGR9 886 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 DLX3O60479 287 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 GNAT1P11488 350 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 POLD1P28340 1107 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 FXNQ16595 210 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms