RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FEM1BQ9UK73 627 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 SERPING1P05155 500 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 ABCB11O95342 1321 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 FAM205AQ6ZU69 1335 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 UBR1Q8IWV7 1749 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 LRRIQ4A6NIV6 560 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 SEC31AO94979 1220 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 EHHADHQ08426 723 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 NAALADL2Q58DX5 795 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 MSANTD4Q8NCY6 345 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 SLC17A8Q8NDX2 589 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 CCDC77Q9BR77 488 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 FAM107BQ9H098 131 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 HOXC10Q9NYD6 342 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 HDLBPQ00341 1268 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 MICALCLQ6ZW33 695 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 WRNIP1Q96S55 665 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 VCPKMTQ9H867 229 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 RGL1Q9NZL6 768 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 DDX41Q9UJV9 622 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 RIC1Q4ADV7 1423 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 IPO5O00410 1097 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 CD44P16070 742 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 ZNF365Q70YC5 407 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 EAPPQ56P03 285 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 PAF1Q8N7H5 531 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 H0YCG3 227 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 ATP2A1O14983 1001 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 CEP72Q9P209 647 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 PPP1R3GB7ZBB8 358 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 LRRC45Q96CN5 670 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 RMDN3Q96TC7 470 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 SEPT9Q9UHD8 586 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 IVLP07476 585 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 KRT19P08727 400 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 MTMR1Q13613 665 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 CCDC25Q86WR0 208 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 TM4SF1P30408 202 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 SERPINA10Q9UK55 444 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 PCDHA13Q9Y5I0 950 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 ZHX2Q9Y6X8 837 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 MYMKA6NI61 221 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 POLRMTO00411 1230 aaKnown RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 MOCS3O95396 460 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 MYL7Q01449 175 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 EDEM3Q9BZQ6 932 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 CHD4Q14839 1912 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA6BA6NDN3 693 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 FXR2P51116 673 aaKnown RBP eCLIP6.87□□□□□ -1.312e-10■■■■■ 45.8
PRKDC-202ENST00000338368 PTK2Q05397 1052 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 DDR1Q08345 913 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 KCNH2Q12809 1159 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 NCAPHQ15003 741 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 GRIK5Q16478 980 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 KNOP1Q1ED39 458 aaKnown RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 CDAN1Q8IWY9 1227 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 TBX3O15119 743 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 EYA4O95677 639 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 GRM1Q13255 1194 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 DMP1Q13316 513 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 FBXO38Q6PIJ6 1188 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 CHP1Q99653 195 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 EIF2AK1Q9BQI3 630 aaKnown RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 USTQ9Y2C2 406 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA8IPA6NC78 632 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA8JA6NMD2 632 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 CCND2P30279 289 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 RHBDL3P58872 404 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 KCTD2Q14681 263 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 MTERF2Q49AM1 385 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 SMIM23A6NLE4 172 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 PDE6CP51160 858 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 PRELPP51888 382 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 ZBTB8OSQ8IWT0 167 aa6.87□□□□□ -1.31
PRKDC-202ENST00000338368 UTP11Q9Y3A2 253 aaKnown RBP6.87□□□□□ -1.31
PRKDC-202ENST00000338368 RAD9BQ6WBX8 426 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 RASGRP2Q7LDG7 609 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 DPH5Q9H2P9 285 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 KRIT1O00522 736 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 VEGFAP15692 232 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 GRB10Q13322 594 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 CCDC105Q8IYK2 499 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 MAIP1Q8WWC4 291 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 CCDC114Q96M63 670 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 SLC37A4O43826 429 aa6.86□□□□□ -1.31
PRKDC-202ENST00000338368 EZH2Q15910 746 aaKnown RBP6.86□□□□□ -1.31
PRKDC-202ENST00000338368 PDXDC2PQ6P474 469 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms